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Journal Abstract Search

649 related items for PubMed ID: 17428500

  • 1. Thermodynamic and structural basis for transition-state stabilization in antibody-catalyzed hydrolysis.
    Oda M, Ito N, Tsumuraya T, Suzuki K, Sakakura M, Fujii I.
    J Mol Biol; 2007 May 25; 369(1):198-209. PubMed ID: 17428500
    [Abstract] [Full Text] [Related]

  • 2. Structural basis of the transition-state stabilization in antibody-catalyzed hydrolysis.
    Sakakura M, Takahashi H, Shimba N, Fujii I, Shimada I.
    J Mol Biol; 2007 Mar 16; 367(1):133-47. PubMed ID: 17239396
    [Abstract] [Full Text] [Related]

  • 3. A structural basis for transition-state stabilization in antibody-catalyzed hydrolysis: crystal structures of an abzyme at 1. 8 A resolution.
    Kristensen O, Vassylyev DG, Tanaka F, Morikawa K, Fujii I.
    J Mol Biol; 1998 Aug 21; 281(3):501-11. PubMed ID: 9698565
    [Abstract] [Full Text] [Related]

  • 4. Site-directed mutagenesis of active site contact residues in a hydrolytic abzyme: evidence for an essential histidine involved in transition state stabilization.
    Miyashita H, Hara T, Tanimura R, Fukuyama S, Cagnon C, Kohara A, Fujii I.
    J Mol Biol; 1997 Apr 18; 267(5):1247-57. PubMed ID: 9150409
    [Abstract] [Full Text] [Related]

  • 5. Directed evolution governed by controlling the molecular recognition between an abzyme and its haptenic transition-state analog.
    Takahashi-Ando N, Kakinuma H, Fujii I, Nishi Y.
    J Immunol Methods; 2004 Nov 18; 294(1-2):1-14. PubMed ID: 15604011
    [Abstract] [Full Text] [Related]

  • 6. Molecular mechanisms of improvement of hydrolytic antibody 6D9 by site-directed mutagenesis.
    Takahashi-Ando N, Shimazaki K, Kakinuma H, Fujii I, Nishi Y.
    J Biochem; 2006 Oct 18; 140(4):509-15. PubMed ID: 16921165
    [Abstract] [Full Text] [Related]

  • 7. Effects of substrate conformational strain on binding kinetics of catalytic antibodies.
    Oda M, Tsumuraya T, Fujii I.
    Biophys Physicobiol; 2016 Oct 18; 13():135-138. PubMed ID: 27924267
    [Abstract] [Full Text] [Related]

  • 8. Structural basis for a disfavored elimination reaction in catalytic antibody 1D4.
    Larsen NA, Heine A, Crane L, Cravatt BF, Lerner RA, Wilson IA.
    J Mol Biol; 2001 Nov 16; 314(1):93-102. PubMed ID: 11724535
    [Abstract] [Full Text] [Related]

  • 9. Structural basis for amide hydrolysis catalyzed by the 43C9 antibody.
    Thayer MM, Olender EH, Arvai AS, Koike CK, Canestrelli IL, Stewart JD, Benkovic SJ, Getzoff ED, Roberts VA.
    J Mol Biol; 1999 Aug 13; 291(2):329-45. PubMed ID: 10438624
    [Abstract] [Full Text] [Related]

  • 10. Crossreactivity, efficiency and catalytic specificity of an esterase-like antibody.
    Gigant B, Charbonnier JB, Eshhar Z, Green BS, Knossow M.
    J Mol Biol; 1998 Dec 04; 284(3):741-50. PubMed ID: 9826512
    [Abstract] [Full Text] [Related]

  • 11. In vitro abzyme evolution to optimize antibody recognition for catalysis.
    Takahashi N, Kakinuma H, Liu L, Nishi Y, Fujii I.
    Nat Biotechnol; 2001 Jun 04; 19(6):563-7. PubMed ID: 11385462
    [Abstract] [Full Text] [Related]

  • 12. Transition state docking: a probe for noncovalent catalysis in biological systems. Application to antibody-catalyzed ester hydrolysis.
    Tantillo DJ, Houk KN.
    J Comput Chem; 2002 Jan 15; 23(1):84-95. PubMed ID: 11913392
    [Abstract] [Full Text] [Related]

  • 13. Crystallographic and biochemical analysis of cocaine-degrading antibody 15A10.
    Larsen NA, de Prada P, Deng SX, Mittal A, Braskett M, Zhu X, Wilson IA, Landry DW.
    Biochemistry; 2004 Jun 29; 43(25):8067-76. PubMed ID: 15209502
    [Abstract] [Full Text] [Related]

  • 14. Display of a functional hetero-oligomeric catalytic antibody on the yeast cell surface.
    Lin Y, Tsumuraya T, Wakabayashi T, Shiraga S, Fujii I, Kondo A, Ueda M.
    Appl Microbiol Biotechnol; 2003 Aug 29; 62(2-3):226-32. PubMed ID: 12883868
    [Abstract] [Full Text] [Related]

  • 15. Conformational effects in biological catalysis: an antibody-catalyzed oxy-cope rearrangement.
    Mundorff EC, Hanson MA, Varvak A, Ulrich H, Schultz PG, Stevens RC.
    Biochemistry; 2000 Feb 01; 39(4):627-32. PubMed ID: 10651626
    [Abstract] [Full Text] [Related]

  • 16. Structural basis for antibody catalysis of a disfavored ring closure reaction.
    Gruber K, Zhou B, Houk KN, Lerner RA, Shevlin CG, Wilson IA.
    Biochemistry; 1999 Jun 01; 38(22):7062-74. PubMed ID: 10353817
    [Abstract] [Full Text] [Related]

  • 17. Thermodynamics of ligand binding and catalysis in human liver medium-chain acyl-CoA dehydrogenase: comparative studies involving normal and 3'-dephosphorylated C8-CoAs and wild-type and Asn191 --> Ala (N191A) mutant enzymes.
    Peterson KL, Peterson KM, Srivastava DK.
    Biochemistry; 1998 Sep 08; 37(36):12659-71. PubMed ID: 9730839
    [Abstract] [Full Text] [Related]

  • 18. Diverse structural solutions to catalysis in a family of antibodies.
    Gigant B, Tsumuraya T, Fujii I, Knossow M.
    Structure; 1999 Nov 15; 7(11):1385-93. PubMed ID: 10574796
    [Abstract] [Full Text] [Related]

  • 19. Complete reaction cycle of a cocaine catalytic antibody at atomic resolution.
    Zhu X, Dickerson TJ, Rogers CJ, Kaufmann GF, Mee JM, McKenzie KM, Janda KD, Wilson IA.
    Structure; 2006 Feb 15; 14(2):205-16. PubMed ID: 16472740
    [Abstract] [Full Text] [Related]

  • 20. Positional ordering of reacting groups contributes significantly to the efficiency of proton transfer at an antibody active site.
    Seebeck FP, Hilvert D.
    J Am Chem Soc; 2005 Feb 02; 127(4):1307-12. PubMed ID: 15669871
    [Abstract] [Full Text] [Related]

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