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Journal Abstract Search


658 related items for PubMed ID: 17488737

  • 1. Fair-balance paradox, star-tree paradox, and Bayesian phylogenetics.
    Yang Z.
    Mol Biol Evol; 2007 Aug; 24(8):1639-55. PubMed ID: 17488737
    [Abstract] [Full Text] [Related]

  • 2. Is there a star tree paradox?
    Kolaczkowski B, Thornton JW.
    Mol Biol Evol; 2006 Oct; 23(10):1819-23. PubMed ID: 16837562
    [Abstract] [Full Text] [Related]

  • 3. Branch-length prior influences Bayesian posterior probability of phylogeny.
    Yang Z, Rannala B.
    Syst Biol; 2005 Jun; 54(3):455-70. PubMed ID: 16012111
    [Abstract] [Full Text] [Related]

  • 4. Effects of branch length uncertainty on Bayesian posterior probabilities for phylogenetic hypotheses.
    Kolaczkowski B, Thornton JW.
    Mol Biol Evol; 2007 Sep; 24(9):2108-18. PubMed ID: 17636043
    [Abstract] [Full Text] [Related]

  • 5. Species trees from gene trees: reconstructing Bayesian posterior distributions of a species phylogeny using estimated gene tree distributions.
    Liu L, Pearl DK.
    Syst Biol; 2007 Jun; 56(3):504-14. PubMed ID: 17562474
    [Abstract] [Full Text] [Related]

  • 6. Estimating trees from filtered data: identifiability of models for morphological phylogenetics.
    Allman ES, Holder MT, Rhodes JA.
    J Theor Biol; 2010 Mar 07; 263(1):108-19. PubMed ID: 20004210
    [Abstract] [Full Text] [Related]

  • 7. Tail paradox, partial identifiability, and influential priors in Bayesian branch length inference.
    Rannala B, Zhu T, Yang Z.
    Mol Biol Evol; 2012 Jan 07; 29(1):325-35. PubMed ID: 21890479
    [Abstract] [Full Text] [Related]

  • 8. Frequentist properties of Bayesian posterior probabilities of phylogenetic trees under simple and complex substitution models.
    Huelsenbeck J, Rannala B.
    Syst Biol; 2004 Dec 07; 53(6):904-13. PubMed ID: 15764559
    [Abstract] [Full Text] [Related]

  • 9. Fundamental differences between the methods of maximum likelihood and maximum posterior probability in phylogenetics.
    Svennblad B, Erixon P, Oxelman B, Britton T.
    Syst Biol; 2006 Feb 07; 55(1):116-21. PubMed ID: 16507528
    [Abstract] [Full Text] [Related]

  • 10. Summarizing a posterior distribution of trees using agreement subtrees.
    Cranston KA, Rannala B.
    Syst Biol; 2007 Aug 07; 56(4):578-90. PubMed ID: 17654363
    [Abstract] [Full Text] [Related]

  • 11. Polytomies and Bayesian phylogenetic inference.
    Lewis PO, Holder MT, Holsinger KE.
    Syst Biol; 2005 Apr 07; 54(2):241-53. PubMed ID: 16012095
    [Abstract] [Full Text] [Related]

  • 12. On the distributions of bootstrap support and posterior distributions for a star tree.
    Susko E.
    Syst Biol; 2008 Aug 07; 57(4):602-12. PubMed ID: 18709598
    [Abstract] [Full Text] [Related]

  • 13. The Bayesian "star paradox" persists for long finite sequences.
    Steel M, Matsen FA.
    Mol Biol Evol; 2007 Apr 07; 24(4):1075-9. PubMed ID: 17299027
    [Abstract] [Full Text] [Related]

  • 14. Coalescent methods for estimating phylogenetic trees.
    Liu L, Yu L, Kubatko L, Pearl DK, Edwards SV.
    Mol Phylogenet Evol; 2009 Oct 07; 53(1):320-8. PubMed ID: 19501178
    [Abstract] [Full Text] [Related]

  • 15. Estimating species trees using multiple-allele DNA sequence data.
    Liu L, Pearl DK, Brumfield RT, Edwards SV.
    Evolution; 2008 Aug 07; 62(8):2080-91. PubMed ID: 18462214
    [Abstract] [Full Text] [Related]

  • 16. Evolutionary tree reconstruction using structural expectation maximization and homotopy.
    Li J, Guo M.
    Genet Mol Res; 2007 Sep 05; 6(3):522-33. PubMed ID: 17985305
    [Abstract] [Full Text] [Related]

  • 17. Very fast algorithms for evaluating the stability of ML and Bayesian phylogenetic trees from sequence data.
    Waddell PJ, Kishino H, Ota R.
    Genome Inform; 2002 Sep 05; 13():82-92. PubMed ID: 14571377
    [Abstract] [Full Text] [Related]

  • 18. Bayesian inference of phylogeny and its impact on evolutionary biology.
    Huelsenbeck JP, Ronquist F, Nielsen R, Bollback JP.
    Science; 2001 Dec 14; 294(5550):2310-4. PubMed ID: 11743192
    [Abstract] [Full Text] [Related]

  • 19. Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds.
    Yang Z, Rannala B.
    Mol Biol Evol; 2006 Jan 14; 23(1):212-26. PubMed ID: 16177230
    [Abstract] [Full Text] [Related]

  • 20. Bayesian selection of misspecified models is overconfident and may cause spurious posterior probabilities for phylogenetic trees.
    Yang Z, Zhu T.
    Proc Natl Acad Sci U S A; 2018 Feb 20; 115(8):1854-1859. PubMed ID: 29432193
    [Abstract] [Full Text] [Related]


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