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Pubmed for Handhelds

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Journal Abstract Search

214 related items for PubMed ID: 17488754

  • 21. A statistical analysis of the TRANSFAC database.
    Fogel GB, Weekes DG, Varga G, Dow ER, Craven AM, Harlow HB, Su EW, Onyia JE, Su C.
    Biosystems; 2005 Aug; 81(2):137-54. PubMed ID: 15941617
    [Abstract] [Full Text] [Related]

  • 22. An approach to predict transcription factor DNA binding site specificity based upon gene and transcription factor functional categorization.
    Qian Z, Lu L, Liu X, Cai YD, Li Y.
    Bioinformatics; 2007 Sep 15; 23(18):2449-54. PubMed ID: 17623704
    [Abstract] [Full Text] [Related]

  • 23. Nucleotide variation of regulatory motifs may lead to distinct expression patterns.
    Segal L, Lapidot M, Solan Z, Ruppin E, Pilpel Y, Horn D.
    Bioinformatics; 2007 Jul 01; 23(13):i440-9. PubMed ID: 17646329
    [Abstract] [Full Text] [Related]

  • 24. Functional inference from non-random distributions of conserved predicted transcription factor binding sites.
    Dieterich C, Rahmann S, Vingron M.
    Bioinformatics; 2004 Aug 04; 20 Suppl 1():i109-15. PubMed ID: 15262788
    [Abstract] [Full Text] [Related]

  • 25. Regression trees for regulatory element identification.
    Phuong TM, Lee D, Lee KH.
    Bioinformatics; 2004 Mar 22; 20(5):750-7. PubMed ID: 14751992
    [Abstract] [Full Text] [Related]

  • 26. FactorY, a bioinformatic resource for genome-wide promoter analysis.
    Guruceaga E, Segura V, Corrales FJ, Rubio A.
    Comput Biol Med; 2009 Apr 22; 39(4):385-7. PubMed ID: 19272592
    [Abstract] [Full Text] [Related]

  • 27. MotifCombinator: a web-based tool to search for combinations of cis-regulatory motifs.
    Kato M, Tsunoda T.
    BMC Bioinformatics; 2007 Mar 22; 8():100. PubMed ID: 17378935
    [Abstract] [Full Text] [Related]

  • 28. Motif detection in Arabidopsis: correlation with gene expression data.
    Janaki C, Joshi RR.
    In Silico Biol; 2004 Mar 22; 4(2):149-61. PubMed ID: 15107020
    [Abstract] [Full Text] [Related]

  • 29. Identifying transcription factor functions and targets by phenotypic activation.
    Chua G, Morris QD, Sopko R, Robinson MD, Ryan O, Chan ET, Frey BJ, Andrews BJ, Boone C, Hughes TR.
    Proc Natl Acad Sci U S A; 2006 Aug 08; 103(32):12045-50. PubMed ID: 16880382
    [Abstract] [Full Text] [Related]

  • 30. Prosecutor: parameter-free inference of gene function for prokaryotes using DNA microarray data, genomic context and multiple gene annotation sources.
    Blom EJ, Breitling R, Hofstede KJ, Roerdink JB, van Hijum SA, Kuipers OP.
    BMC Genomics; 2008 Oct 21; 9():495. PubMed ID: 18939968
    [Abstract] [Full Text] [Related]

  • 31. Improved detection of DNA motifs using a self-organized clustering of familial binding profiles.
    Mahony S, Golden A, Smith TJ, Benos PV.
    Bioinformatics; 2005 Jun 21; 21 Suppl 1():i283-91. PubMed ID: 15961468
    [Abstract] [Full Text] [Related]

  • 32. Transcription factor map alignment of promoter regions.
    Blanco E, Messeguer X, Smith TF, Guigó R.
    PLoS Comput Biol; 2006 May 21; 2(5):e49. PubMed ID: 16733547
    [Abstract] [Full Text] [Related]

  • 33. ITFP: an integrated platform of mammalian transcription factors.
    Zheng G, Tu K, Yang Q, Xiong Y, Wei C, Xie L, Zhu Y, Li Y.
    Bioinformatics; 2008 Oct 15; 24(20):2416-7. PubMed ID: 18713790
    [Abstract] [Full Text] [Related]

  • 34. Computational biology: toward deciphering gene regulatory information in mammalian genomes.
    Ji H, Wong WH.
    Biometrics; 2006 Sep 15; 62(3):645-63. PubMed ID: 16984301
    [Abstract] [Full Text] [Related]

  • 35. Systematic detection of statistically overrepresented DNA motif association rules.
    Lin JM, Weng Z.
    Genome Inform; 2006 Sep 15; 17(1):124-33. PubMed ID: 17503362
    [Abstract] [Full Text] [Related]

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  • 38. The effects of probe binding affinity differences on gene expression measurements and how to deal with them.
    Dannemann M, Lorenc A, Hellmann I, Khaitovich P, Lachmann M.
    Bioinformatics; 2009 Nov 01; 25(21):2772-9. PubMed ID: 19689957
    [Abstract] [Full Text] [Related]

  • 39. Inferring direct regulatory targets of a transcription factor in the DREAM2 challenge.
    Vega VB, Woo XY, Hamidi H, Yeo HC, Yeo ZX, Bourque G, Clarke ND.
    Ann N Y Acad Sci; 2009 Mar 01; 1158():215-23. PubMed ID: 19348643
    [Abstract] [Full Text] [Related]

  • 40. Model-based identification of cis-acting elements from microarray data.
    Liu Y, Taylor MW, Edenberg HJ.
    Genomics; 2006 Oct 01; 88(4):452-61. PubMed ID: 16716564
    [Abstract] [Full Text] [Related]

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