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Journal Abstract Search

655 related items for PubMed ID: 17764265

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  • 4. Coupling the Level-Set Method with Molecular Mechanics for Variational Implicit Solvation of Nonpolar Molecules.
    Cheng LT, Xie Y, Dzubiella J, McCammon JA, Che J, Li B.
    J Chem Theory Comput; 2009 Feb 10; 5(2):257-266. PubMed ID: 20150952
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  • 6. A self-consistent phase-field approach to implicit solvation of charged molecules with Poisson-Boltzmann electrostatics.
    Sun H, Wen J, Zhao Y, Li B, McCammon JA.
    J Chem Phys; 2015 Dec 28; 143(24):243110. PubMed ID: 26723595
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  • 7. On the nonpolar hydration free energy of proteins: surface area and continuum solvent models for the solute-solvent interaction energy.
    Levy RM, Zhang LY, Gallicchio E, Felts AK.
    J Am Chem Soc; 2003 Aug 06; 125(31):9523-30. PubMed ID: 12889983
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  • 8. Free energy of solvation from molecular dynamics simulations for low dielectric solvents.
    Gonçalves PF, Stassen H.
    J Comput Chem; 2003 Nov 15; 24(14):1758-65. PubMed ID: 12964194
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  • 9. Rapid refinement of protein interfaces incorporating solvation: application to the docking problem.
    Jackson RM, Gabb HA, Sternberg MJ.
    J Mol Biol; 1998 Feb 13; 276(1):265-85. PubMed ID: 9514726
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  • 11. FACTS: Fast analytical continuum treatment of solvation.
    Haberthür U, Caflisch A.
    J Comput Chem; 2008 Apr 15; 29(5):701-15. PubMed ID: 17918282
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  • 13. Implicit modeling of nonpolar solvation for simulating protein folding and conformational transitions.
    Chen J, Brooks CL.
    Phys Chem Chem Phys; 2008 Jan 28; 10(4):471-81. PubMed ID: 18183310
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  • 14. New approach to free energy of solvation applying continuum models to molecular dynamics simulation.
    Gonçalves PF, Stassen H.
    J Comput Chem; 2002 May 28; 23(7):706-14. PubMed ID: 11948588
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  • 16. Level-Set Variational Implicit-Solvent Modeling of Biomolecules with the Coulomb-Field Approximation.
    Wang Z, Che J, Cheng LT, Dzubiella J, Li B, McCammon JA.
    J Chem Theory Comput; 2012 Feb 14; 8(2):386-397. PubMed ID: 22346739
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  • 17. Improving the performance of the coupled reference interaction site model-hyper-netted chain (RISM-HNC)/simulation method for free energy of solvation.
    Freedman H, Le L, Tuszynski JA, Truong TN.
    J Phys Chem B; 2008 Feb 28; 112(8):2340-8. PubMed ID: 18251537
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  • 18. Universal solvation model based on solute electron density and on a continuum model of the solvent defined by the bulk dielectric constant and atomic surface tensions.
    Marenich AV, Cramer CJ, Truhlar DG.
    J Phys Chem B; 2009 May 07; 113(18):6378-96. PubMed ID: 19366259
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  • 19. An efficient mean solvation force model for use in molecular dynamics simulations of proteins in aqueous solution.
    Fraternali F, Van Gunsteren WF.
    J Mol Biol; 1996 Mar 15; 256(5):939-48. PubMed ID: 8601844
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