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Journal Abstract Search

262 related items for PubMed ID: 17825010

  • 1.
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  • 2. ChIPmix: mixture model of regressions for two-color ChIP-chip analysis.
    Martin-Magniette ML, Mary-Huard T, Bérard C, Robin S.
    Bioinformatics; 2008 Aug 15; 24(16):i181-6. PubMed ID: 18689822
    [Abstract] [Full Text] [Related]

  • 3. High-resolution computational models of genome binding events.
    Qi Y, Rolfe A, MacIsaac KD, Gerber GK, Pokholok D, Zeitlinger J, Danford T, Dowell RD, Fraenkel E, Jaakkola TS, Young RA, Gifford DK.
    Nat Biotechnol; 2006 Aug 15; 24(8):963-70. PubMed ID: 16900145
    [Abstract] [Full Text] [Related]

  • 4. rMAT--an R/Bioconductor package for analyzing ChIP-chip experiments.
    Droit A, Cheung C, Gottardo R.
    Bioinformatics; 2010 Mar 01; 26(5):678-9. PubMed ID: 20089513
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  • 6. ChIP-on-chip analysis of DNA topoisomerases.
    Bermejo R, Katou YM, Shirahige K, Foiani M.
    Methods Mol Biol; 2009 Mar 01; 582():103-18. PubMed ID: 19763945
    [Abstract] [Full Text] [Related]

  • 7. A hidden Markov model for analyzing ChIP-chip experiments on genome tiling arrays and its application to p53 binding sequences.
    Li W, Meyer CA, Liu XS.
    Bioinformatics; 2005 Jun 01; 21 Suppl 1():i274-82. PubMed ID: 15961467
    [Abstract] [Full Text] [Related]

  • 8. Statistics for ChIP-chip and DNase hypersensitivity experiments on NimbleGen arrays.
    Scacheri PC, Crawford GE, Davis S.
    Methods Enzymol; 2006 Jun 01; 411():270-82. PubMed ID: 16939795
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  • 11. Genome-wide mapping of protein-DNA interaction by chromatin immunoprecipitation and DNA microarray hybridization (ChIP-chip). Part B: ChIP-chip data analysis.
    Göbel U, Reimer J, Turck F.
    Methods Mol Biol; 2010 Jun 01; 631():161-84. PubMed ID: 20204875
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  • 13. Improved genome-wide localization by ChIP-chip using double-round T7 RNA polymerase-based amplification.
    van Bakel H, van Werven FJ, Radonjic M, Brok MO, van Leenen D, Holstege FC, Timmers HT.
    Nucleic Acids Res; 2008 Mar 01; 36(4):e21. PubMed ID: 18180247
    [Abstract] [Full Text] [Related]

  • 14. Applications of DNA tiling arrays for whole-genome analysis.
    Mockler TC, Chan S, Sundaresan A, Chen H, Jacobsen SE, Ecker JR.
    Genomics; 2005 Jan 01; 85(1):1-15. PubMed ID: 15607417
    [Abstract] [Full Text] [Related]

  • 15. Mapping the distribution of chromatin proteins by ChIP on chip.
    Nègre N, Lavrov S, Hennetin J, Bellis M, Cavalli G.
    Methods Enzymol; 2006 Jan 01; 410():316-41. PubMed ID: 16938558
    [Abstract] [Full Text] [Related]

  • 16. Modeling and analysis of ChIP-chip experiments.
    Gottardo R.
    Methods Mol Biol; 2009 Jan 01; 567():133-43. PubMed ID: 19588090
    [Abstract] [Full Text] [Related]

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  • 18. Processing ChIP-chip data: from the scanner to the browser.
    Cauchy P, Benoukraf T, Ferrier P.
    Methods Mol Biol; 2011 Jan 01; 719():251-68. PubMed ID: 21370088
    [Abstract] [Full Text] [Related]

  • 19. JAMIE: A software tool for jointly analyzing multiple ChIP-chip experiments.
    Wu H, Ji H.
    Methods Mol Biol; 2012 Jan 01; 802():363-75. PubMed ID: 22130893
    [Abstract] [Full Text] [Related]

  • 20. Utilizing tiling microarrays for whole-genome analysis in plants.
    Gregory BD, Yazaki J, Ecker JR.
    Plant J; 2008 Feb 01; 53(4):636-44. PubMed ID: 18269573
    [Abstract] [Full Text] [Related]

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