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Journal Abstract Search

387 related items for PubMed ID: 17980031

  • 1. Extracting gene expression patterns and identifying co-expressed genes from microarray data reveals biologically responsive processes.
    Chou JW, Zhou T, Kaufmann WK, Paules RS, Bushel PR.
    BMC Bioinformatics; 2007 Nov 02; 8():427. PubMed ID: 17980031
    [Abstract] [Full Text] [Related]

  • 2. Methods for evaluating clustering algorithms for gene expression data using a reference set of functional classes.
    Datta S, Datta S.
    BMC Bioinformatics; 2006 Aug 31; 7():397. PubMed ID: 16945146
    [Abstract] [Full Text] [Related]

  • 3. EPIG-Seq: extracting patterns and identifying co-expressed genes from RNA-Seq data.
    Li J, Bushel PR.
    BMC Genomics; 2016 Mar 22; 17():255. PubMed ID: 27004791
    [Abstract] [Full Text] [Related]

  • 4. Mining co-regulated gene profiles for the detection of functional associations in gene expression data.
    Gyenesei A, Wagner U, Barkow-Oesterreicher S, Stolte E, Schlapbach R.
    Bioinformatics; 2007 Aug 01; 23(15):1927-35. PubMed ID: 17537754
    [Abstract] [Full Text] [Related]

  • 5. Clustering and re-clustering for pattern discovery in gene expression data.
    Ma PC, Chan KC, Chiu DK.
    J Bioinform Comput Biol; 2005 Apr 01; 3(2):281-301. PubMed ID: 15852506
    [Abstract] [Full Text] [Related]

  • 6. Identifying projected clusters from gene expression profiles.
    Yip KY, Cheung DW, Ng MK, Cheung KH.
    J Biomed Inform; 2004 Oct 01; 37(5):345-57. PubMed ID: 15488748
    [Abstract] [Full Text] [Related]

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  • 8. Profiles of global gene expression in ionizing-radiation-damaged human diploid fibroblasts reveal synchronization behind the G1 checkpoint in a G0-like state of quiescence.
    Zhou T, Chou JW, Simpson DA, Zhou Y, Mullen TE, Medeiros M, Bushel PR, Paules RS, Yang X, Hurban P, Lobenhofer EK, Kaufmann WK.
    Environ Health Perspect; 2006 Apr 01; 114(4):553-9. PubMed ID: 16581545
    [Abstract] [Full Text] [Related]

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  • 10. Conditional clustering of temporal expression profiles.
    Wang L, Montano M, Rarick M, Sebastiani P.
    BMC Bioinformatics; 2008 Mar 11; 9():147. PubMed ID: 18334028
    [Abstract] [Full Text] [Related]

  • 11. Clustering of change patterns using Fourier coefficients.
    Kim J, Kim H.
    Bioinformatics; 2008 Jan 15; 24(2):184-91. PubMed ID: 18025003
    [Abstract] [Full Text] [Related]

  • 12. Knowledge guided analysis of microarray data.
    Fang Z, Yang J, Li Y, Luo Q, Liu L.
    J Biomed Inform; 2006 Aug 15; 39(4):401-11. PubMed ID: 16214421
    [Abstract] [Full Text] [Related]

  • 13. Query-driven module discovery in microarray data.
    Dhollander T, Sheng Q, Lemmens K, De Moor B, Marchal K, Moreau Y.
    Bioinformatics; 2007 Oct 01; 23(19):2573-80. PubMed ID: 17686800
    [Abstract] [Full Text] [Related]

  • 14. Knowledge-guided multi-scale independent component analysis for biomarker identification.
    Chen L, Xuan J, Wang C, Shih IeM, Wang Y, Zhang Z, Hoffman E, Clarke R.
    BMC Bioinformatics; 2008 Oct 06; 9():416. PubMed ID: 18837990
    [Abstract] [Full Text] [Related]

  • 15. Integrated analysis of gene expression by Association Rules Discovery.
    Carmona-Saez P, Chagoyen M, Rodriguez A, Trelles O, Carazo JM, Pascual-Montano A.
    BMC Bioinformatics; 2006 Feb 07; 7():54. PubMed ID: 16464256
    [Abstract] [Full Text] [Related]

  • 16. Handling gene redundancy in microarray data using Grey Relational Analysis.
    Zhang LJ, Li ZJ, Chen HW.
    Int J Data Min Bioinform; 2008 Feb 07; 2(2):134-44. PubMed ID: 18767351
    [Abstract] [Full Text] [Related]

  • 17. Ensemble attribute profile clustering: discovering and characterizing groups of genes with similar patterns of biological features.
    Semeiks JR, Rizki A, Bissell MJ, Mian IS.
    BMC Bioinformatics; 2006 Mar 16; 7():147. PubMed ID: 16542449
    [Abstract] [Full Text] [Related]

  • 18. Constructing gene co-expression networks and predicting functions of unknown genes by random matrix theory.
    Luo F, Yang Y, Zhong J, Gao H, Khan L, Thompson DK, Zhou J.
    BMC Bioinformatics; 2007 Aug 14; 8():299. PubMed ID: 17697349
    [Abstract] [Full Text] [Related]

  • 19. Clustering of gene expression data and end-point measurements by simulated annealing.
    Bushel PR.
    J Bioinform Comput Biol; 2009 Feb 14; 7(1):193-215. PubMed ID: 19226667
    [Abstract] [Full Text] [Related]

  • 20. Context-specific infinite mixtures for clustering gene expression profiles across diverse microarray dataset.
    Liu X, Sivaganesan S, Yeung KY, Guo J, Bumgarner RE, Medvedovic M.
    Bioinformatics; 2006 Jul 15; 22(14):1737-44. PubMed ID: 16709591
    [Abstract] [Full Text] [Related]

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