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Journal Abstract Search

111 related items for PubMed ID: 18204058

  • 1.
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  • 2. A combinatorial score to distinguish biological and nonbiological protein-protein interfaces.
    Liu S, Li Q, Lai L.
    Proteins; 2006 Jul 01; 64(1):68-78. PubMed ID: 16596649
    [Abstract] [Full Text] [Related]

  • 3. Assessing methods for identifying pair-wise atomic contacts across binding interfaces.
    Fischer TB, Holmes JB, Miller IR, Parsons JR, Tung L, Hu JC, Tsai J.
    J Struct Biol; 2006 Feb 01; 153(2):103-12. PubMed ID: 16377205
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  • 4. Protein-protein interaction at crystal contacts.
    Janin J, Rodier F.
    Proteins; 1995 Dec 01; 23(4):580-7. PubMed ID: 8749854
    [Abstract] [Full Text] [Related]

  • 5. Physicochemical descriptors to discriminate protein-protein interactions in permanent and transient complexes selected by means of machine learning algorithms.
    Block P, Paern J, Hüllermeier E, Sanschagrin P, Sotriffer CA, Klebe G.
    Proteins; 2006 Nov 15; 65(3):607-22. PubMed ID: 16955490
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  • 8. Comprehensive statistical analysis of residues interaction specificity at protein-protein interfaces.
    Anashkina A, Kuznetsov E, Esipova N, Tumanyan V.
    Proteins; 2007 Jun 01; 67(4):1060-77. PubMed ID: 17357164
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  • 10. [Geometrical analysis of protein-DNA interactions on the basis of the Voronoĭ-Delaune tessellation].
    Anashkina AA, Tumanian VG, Kuznetsov EN, Galkin AV, Esipova NG.
    Biofizika; 2008 Jun 01; 53(3):402-6. PubMed ID: 18634311
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  • 11. Shelling the Voronoi interface of protein-protein complexes reveals patterns of residue conservation, dynamics, and composition.
    Bouvier B, Grünberg R, Nilges M, Cazals F.
    Proteins; 2009 Aug 15; 76(3):677-92. PubMed ID: 19280599
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  • 13. Predicting small ligand binding sites in proteins using backbone structure.
    Bordner AJ.
    Bioinformatics; 2008 Dec 15; 24(24):2865-71. PubMed ID: 18940825
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  • 14. Distinguishing crystallographic from biological interfaces in protein complexes: role of intermolecular contacts and energetics for classification.
    Elez K, Bonvin AMJJ, Vangone A.
    BMC Bioinformatics; 2018 Nov 30; 19(Suppl 15):438. PubMed ID: 30497368
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  • 15. Knowledge of Native Protein-Protein Interfaces Is Sufficient To Construct Predictive Models for the Selection of Binding Candidates.
    Popov P, Grudinin S.
    J Chem Inf Model; 2015 Oct 26; 55(10):2242-55. PubMed ID: 26353078
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  • 16. Development and validation of an empirical free energy function for calculating protein-protein binding free energy surfaces.
    Audie J.
    Biophys Chem; 2009 Feb 26; 139(2-3):84-91. PubMed ID: 19041170
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  • 17. A machine learning based method for the prediction of secretory proteins using amino acid composition, their order and similarity-search.
    Garg A, Raghava GP.
    In Silico Biol; 2008 Feb 26; 8(2):129-40. PubMed ID: 18928201
    [Abstract] [Full Text] [Related]

  • 18. Molecular dynamics-solvated interaction energy studies of protein-protein interactions: the MP1-p14 scaffolding complex.
    Cui Q, Sulea T, Schrag JD, Munger C, Hung MN, Naïm M, Cygler M, Purisima EO.
    J Mol Biol; 2008 Jun 13; 379(4):787-802. PubMed ID: 18479705
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  • 19. Structural adaptation of the subunit interface of oligomeric thermophilic and hyperthermophilic enzymes.
    Maugini E, Tronelli D, Bossa F, Pascarella S.
    Comput Biol Chem; 2009 Apr 13; 33(2):137-48. PubMed ID: 18845483
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  • 20. Sequence-based prediction of protein interaction sites with an integrative method.
    Chen XW, Jeong JC.
    Bioinformatics; 2009 Mar 01; 25(5):585-91. PubMed ID: 19153136
    [Abstract] [Full Text] [Related]

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