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Journal Abstract Search

81 related items for PubMed ID: 18314577

  • 1. From promoter analysis to transcriptional regulatory network prediction using PAINT.
    Gonye GE, Chakravarthula P, Schwaber JS, Vadigepalli R.
    Methods Mol Biol; 2007; 408():49-68. PubMed ID: 18314577
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  • 2. PAINT: a promoter analysis and interaction network generation tool for gene regulatory network identification.
    Vadigepalli R, Chakravarthula P, Zak DE, Schwaber JS, Gonye GE.
    OMICS; 2003; 7(3):235-52. PubMed ID: 14583114
    [Abstract] [Full Text] [Related]

  • 3. CRSD: a comprehensive web server for composite regulatory signature discovery.
    Liu CC, Lin CC, Chen WS, Chen HY, Chang PC, Chen JJ, Yang PC.
    Nucleic Acids Res; 2006 Jul 01; 34(Web Server issue):W571-7. PubMed ID: 16845073
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  • 4. cis-regulatory region analysis using BEARR.
    Vega VB.
    Methods Mol Biol; 2006 Jul 01; 338():119-27. PubMed ID: 16888354
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  • 12. A program toolkit for the analysis of regulatory regions of genes.
    Wyss P, Lazarus SA, Bina M.
    Methods Mol Biol; 2006 Jul 01; 338():135-52. PubMed ID: 16888356
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  • 14. STOP: searching for transcription factor motifs using gene expression.
    Hertzberg L, Izraeli S, Domany E.
    Bioinformatics; 2007 Jul 15; 23(14):1737-43. PubMed ID: 17488754
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  • 17. Computational biology: toward deciphering gene regulatory information in mammalian genomes.
    Ji H, Wong WH.
    Biometrics; 2006 Sep 15; 62(3):645-63. PubMed ID: 16984301
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  • 18. A comparative analysis of relative occurrence of transcription factor binding sites in vertebrate genomes and gene promoter areas.
    Stepanova M, Tiazhelova T, Skoblov M, Baranova A.
    Bioinformatics; 2005 May 01; 21(9):1789-96. PubMed ID: 15699025
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  • 19. BEARR: Batch Extraction and Analysis of cis-Regulatory Regions.
    Vega VB, Bangarusamy DK, Miller LD, Liu ET, Lin CY.
    Nucleic Acids Res; 2004 Jul 01; 32(Web Server issue):W257-60. PubMed ID: 15215391
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  • 20. Genome-wide prediction and analysis of function-specific transcription factor binding sites.
    Long F, Liu H, Hahn C, Sumazin P, Zhang MQ, Zilberstein A.
    In Silico Biol; 2004 Jul 01; 4(4):395-410. PubMed ID: 15506990
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