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Journal Abstract Search

280 related items for PubMed ID: 18426593

  • 1. Linking Cytoscape and the corynebacterial reference database CoryneRegNet.
    Baumbach J, Apeltsin L.
    BMC Genomics; 2008 Apr 21; 9():184. PubMed ID: 18426593
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  • 2. CoryneRegNet 4.0 - A reference database for corynebacterial gene regulatory networks.
    Baumbach J.
    BMC Bioinformatics; 2007 Nov 06; 8():429. PubMed ID: 17986320
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  • 3. Integrated analysis and reconstruction of microbial transcriptional gene regulatory networks using CoryneRegNet.
    Baumbach J, Wittkop T, Kleindt CK, Tauch A.
    Nat Protoc; 2009 Nov 06; 4(6):992-1005. PubMed ID: 19498379
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  • 4. CoryneRegNet: an ontology-based data warehouse of corynebacterial transcription factors and regulatory networks.
    Baumbach J, Brinkrolf K, Czaja LF, Rahmann S, Tauch A.
    BMC Genomics; 2006 Feb 14; 7():24. PubMed ID: 16478536
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  • 5. CoryneRegNet 3.0--an interactive systems biology platform for the analysis of gene regulatory networks in corynebacteria and Escherichia coli.
    Baumbach J, Wittkop T, Rademacher K, Rahmann S, Brinkrolf K, Tauch A.
    J Biotechnol; 2007 Apr 30; 129(2):279-89. PubMed ID: 17229482
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  • 6. Towards the integrated analysis, visualization and reconstruction of microbial gene regulatory networks.
    Baumbach J, Tauch A, Rahmann S.
    Brief Bioinform; 2009 Jan 30; 10(1):75-83. PubMed ID: 19074493
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  • 7. CoryneRegNet 7, the reference database and analysis platform for corynebacterial gene regulatory networks.
    Parise MTD, Parise D, Kato RB, Pauling JK, Tauch A, Azevedo VAC, Baumbach J.
    Sci Data; 2020 May 11; 7(1):142. PubMed ID: 32393779
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  • 8. CoryneRegNet 6.0--Updated database content, new analysis methods and novel features focusing on community demands.
    Pauling J, Röttger R, Tauch A, Azevedo V, Baumbach J.
    Nucleic Acids Res; 2012 Jan 11; 40(Database issue):D610-4. PubMed ID: 22080556
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  • 10. CoryneCenter - an online resource for the integrated analysis of corynebacterial genome and transcriptome data.
    Neuweger H, Baumbach J, Albaum S, Bekel T, Dondrup M, Hüser AT, Kalinowski J, Oehm S, Pühler A, Rahmann S, Weile J, Goesmann A.
    BMC Syst Biol; 2007 Nov 22; 1():55. PubMed ID: 18034885
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  • 14. Browsing metabolic and regulatory networks with BioCyc.
    Latendresse M, Paley S, Karp PD.
    Methods Mol Biol; 2012 Nov 22; 804():197-216. PubMed ID: 22144155
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  • 17. CytoASP: a Cytoscape app for qualitative consistency reasoning, prediction and repair in biological networks.
    Kittas A, Barozet A, Sereshti J, Grabe N, Tsoka S.
    BMC Syst Biol; 2015 Jul 11; 9():34. PubMed ID: 26163265
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  • 18. Orthoscape: a cytoscape application for grouping and visualization KEGG based gene networks by taxonomy and homology principles.
    Mustafin ZS, Lashin SA, Matushkin YG, Gunbin KV, Afonnikov DA.
    BMC Bioinformatics; 2017 Jan 27; 18(Suppl 1):1427. PubMed ID: 28466792
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