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121 related items for PubMed ID: 18517657

  • 1. Structural property of regulatory elements in human promoters.
    Cao XQ, Zeng J, Yan H.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2008 Apr; 77(4 Pt 1):041908. PubMed ID: 18517657
    [Abstract] [Full Text] [Related]

  • 2. The spatial distribution of cis regulatory elements in yeast promoters and its implications for transcriptional regulation.
    Lin Z, Wu WS, Liang H, Woo Y, Li WH.
    BMC Genomics; 2010 Oct 19; 11():581. PubMed ID: 20958978
    [Abstract] [Full Text] [Related]

  • 3. Genome-wide prediction of transcriptional regulatory elements of human promoters using gene expression and promoter analysis data.
    Kim SY, Kim Y.
    BMC Bioinformatics; 2006 Jul 04; 7():330. PubMed ID: 16817975
    [Abstract] [Full Text] [Related]

  • 4. Molecular and structural considerations of TF-DNA binding for the generation of biologically meaningful and accurate phylogenetic footprinting analysis: the LysR-type transcriptional regulator family as a study model.
    Oliver P, Peralta-Gil M, Tabche ML, Merino E.
    BMC Genomics; 2016 Aug 27; 17(1):686. PubMed ID: 27567672
    [Abstract] [Full Text] [Related]

  • 5. Identification of plant promoter constituents by analysis of local distribution of short sequences.
    Yamamoto YY, Ichida H, Matsui M, Obokata J, Sakurai T, Satou M, Seki M, Shinozaki K, Abe T.
    BMC Genomics; 2007 Mar 08; 8():67. PubMed ID: 17346352
    [Abstract] [Full Text] [Related]

  • 6. Finding human promoter groups based on DNA physical properties.
    Zeng J, Cao XQ, Zhao H, Yan H.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2009 Oct 08; 80(4 Pt 1):041917. PubMed ID: 19905352
    [Abstract] [Full Text] [Related]

  • 7. Position dominant sequence elements in experimentally verified human promoters and their putative relation to cancer.
    Vougas K, Samara A, Spyrou G, Tsangaris GT.
    Cancer Genomics Proteomics; 2009 Oct 08; 6(6):337-55. PubMed ID: 20065321
    [Abstract] [Full Text] [Related]

  • 8. Cis-acting elements responsible for dopaminergic neuron-specific expression of zebrafish slc6a3 (dopamine transporter) in vivo are located remote from the transcriptional start site.
    Bai Q, Burton EA.
    Neuroscience; 2009 Dec 15; 164(3):1138-51. PubMed ID: 19755139
    [Abstract] [Full Text] [Related]

  • 9. Most of the tight positional conservation of transcription factor binding sites near the transcription start site reflects their co-localization within regulatory modules.
    Acevedo-Luna N, Mariño-Ramírez L, Halbert A, Hansen U, Landsman D, Spouge JL.
    BMC Bioinformatics; 2016 Nov 21; 17(1):479. PubMed ID: 27871221
    [Abstract] [Full Text] [Related]

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  • 11. Separate promoters in the human A1 adenosine receptor gene direct the synthesis of distinct messenger RNAs that regulate receptor abundance.
    Ren H, Stiles GL.
    Mol Pharmacol; 1995 Dec 21; 48(6):975-80. PubMed ID: 8848013
    [Abstract] [Full Text] [Related]

  • 12. Gene structure and organization of the human beta-secretase (BACE) promoter.
    Sambamurti K, Kinsey R, Maloney B, Ge YW, Lahiri DK.
    FASEB J; 2004 Jun 21; 18(9):1034-6. PubMed ID: 15059975
    [Abstract] [Full Text] [Related]

  • 13. Frequency distribution of TATA Box and extension sequences on human promoters.
    Shi W, Zhou W.
    BMC Bioinformatics; 2006 Dec 12; 7 Suppl 4(Suppl 4):S2. PubMed ID: 17217512
    [Abstract] [Full Text] [Related]

  • 14. MicroRNA promoter element discovery in Arabidopsis.
    Megraw M, Baev V, Rusinov V, Jensen ST, Kalantidis K, Hatzigeorgiou AG.
    RNA; 2006 Sep 12; 12(9):1612-9. PubMed ID: 16888323
    [Abstract] [Full Text] [Related]

  • 15. The pattern and evolution of yeast promoter bendability.
    Tirosh I, Berman J, Barkai N.
    Trends Genet; 2007 Jul 12; 23(7):318-21. PubMed ID: 17418911
    [Abstract] [Full Text] [Related]

  • 16. Role of DNA sequence based structural features of promoters in transcription initiation and gene expression.
    Bansal M, Kumar A, Yella VR.
    Curr Opin Struct Biol; 2014 Apr 12; 25():77-85. PubMed ID: 24503515
    [Abstract] [Full Text] [Related]

  • 17. Functional modules important for activated expression of early genes of herpes simplex virus type 1 are clustered upstream of the TATA box.
    Pande NT, Petroski MD, Wagner EK.
    Virology; 1998 Jun 20; 246(1):145-57. PubMed ID: 9657002
    [Abstract] [Full Text] [Related]

  • 18. Core promoter elements of eukaryotic genes have a highly distinctive mechanical property.
    Fukue Y, Sumida N, Nishikawa J, Ohyama T.
    Nucleic Acids Res; 2004 Jun 20; 32(19):5834-40. PubMed ID: 15520466
    [Abstract] [Full Text] [Related]

  • 19. Human thyroxine-binding globulin gene: complete sequence and transcriptional regulation.
    Hayashi Y, Mori Y, Janssen OE, Sunthornthepvarakul T, Weiss RE, Takeda K, Weinberg M, Seo H, Bell GI, Refetoff S.
    Mol Endocrinol; 1993 Aug 20; 7(8):1049-60. PubMed ID: 8232304
    [Abstract] [Full Text] [Related]

  • 20. Identification of estrogen-responsive genes using a genome-wide analysis of promoter elements for transcription factor binding sites.
    Kamalakaran S, Radhakrishnan SK, Beck WT.
    J Biol Chem; 2005 Jun 03; 280(22):21491-7. PubMed ID: 15790569
    [Abstract] [Full Text] [Related]

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