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Journal Abstract Search

1084 related items for PubMed ID: 18582096

  • 1. Molecular dynamics study of the solvation of an alpha-helical transmembrane peptide by DMSO.
    Duarte AM, van Mierlo CP, Hemminga MA.
    J Phys Chem B; 2008 Jul 24; 112(29):8664-71. PubMed ID: 18582096
    [Abstract] [Full Text] [Related]

  • 2. Molecular dynamics simulation of folding of a short helical peptide with many charged residues.
    Wei CC, Ho MH, Wang WH, Sun YC.
    J Phys Chem B; 2005 Oct 27; 109(42):19980-6. PubMed ID: 16853583
    [Abstract] [Full Text] [Related]

  • 3. Solubilization of V-ATPase transmembrane peptides by amphipol A8-35.
    Duarte AM, Wolfs CJ, Koehorst RB, Popot JL, Hemminga MA.
    J Pept Sci; 2008 Apr 27; 14(4):389-93. PubMed ID: 18098332
    [Abstract] [Full Text] [Related]

  • 4. Molecular dynamics simulations of a beta-hairpin fragment of protein G: balance between side-chain and backbone forces.
    Ma B, Nussinov R.
    J Mol Biol; 2000 Mar 03; 296(4):1091-104. PubMed ID: 10686106
    [Abstract] [Full Text] [Related]

  • 5. Molecular dynamics simulations of peptides and proteins with a continuum electrostatic model based on screened Coulomb potentials.
    Hassan SA, Mehler EL, Zhang D, Weinstein H.
    Proteins; 2003 Apr 01; 51(1):109-25. PubMed ID: 12596268
    [Abstract] [Full Text] [Related]

  • 6. Amino acid conformational preferences and solvation of polar backbone atoms in peptides and proteins.
    Avbelj F.
    J Mol Biol; 2000 Jul 28; 300(5):1335-59. PubMed ID: 10903873
    [Abstract] [Full Text] [Related]

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  • 8. Structure and localization of an essential transmembrane segment of the proton translocation channel of yeast H+-V-ATPase.
    Duarte AM, Wolfs CJ, van Nuland NA, Harrison MA, Findlay JB, van Mierlo CP, Hemminga MA.
    Biochim Biophys Acta; 2007 Feb 28; 1768(2):218-27. PubMed ID: 16962559
    [Abstract] [Full Text] [Related]

  • 9. Position-dependence of stabilizing polar interactions of asparagine in transmembrane helical bundles.
    Lear JD, Gratkowski H, Adamian L, Liang J, DeGrado WF.
    Biochemistry; 2003 Jun 03; 42(21):6400-7. PubMed ID: 12767221
    [Abstract] [Full Text] [Related]

  • 10. Segment TM7 from the cytoplasmic hemi-channel from VO-H+-V-ATPase includes a flexible region that has a potential role in proton translocation.
    Duarte AM, de Jong ER, Wechselberger R, van Mierlo CP, Hemminga MA.
    Biochim Biophys Acta; 2007 Sep 03; 1768(9):2263-70. PubMed ID: 17573038
    [Abstract] [Full Text] [Related]

  • 11. Dermaseptin S9, an alpha-helical antimicrobial peptide with a hydrophobic core and cationic termini.
    Lequin O, Ladram A, Chabbert L, Bruston F, Convert O, Vanhoye D, Chassaing G, Nicolas P, Amiche M.
    Biochemistry; 2006 Jan 17; 45(2):468-80. PubMed ID: 16401077
    [Abstract] [Full Text] [Related]

  • 12. Examination of the folding of a short alanine-based helical peptide with salt bridges using molecular dynamics simulation.
    Wang WZ, Lin T, Sun YC.
    J Phys Chem B; 2007 Apr 05; 111(13):3508-14. PubMed ID: 17388513
    [Abstract] [Full Text] [Related]

  • 13. Characterization of the denaturation of human alpha-lactalbumin in urea by molecular dynamics simulations.
    Smith LJ, Jones RM, van Gunsteren WF.
    Proteins; 2005 Feb 01; 58(2):439-49. PubMed ID: 15558602
    [Abstract] [Full Text] [Related]

  • 14. Solvation of transmembrane proteins by isotropic membrane mimetics: a molecular dynamics study.
    Mottamal M, Shen S, Guembe C, Krilov G.
    J Phys Chem B; 2007 Sep 27; 111(38):11285-96. PubMed ID: 17784746
    [Abstract] [Full Text] [Related]

  • 15. Spectroscopical identification of residues of subunit G of the yeast V-ATPase in its connection with subunit E.
    Rishikesan S, Thaker YR, Priya R, Gayen S, Manimekalai MS, Hunke C, Gruber G.
    Mol Membr Biol; 2008 Aug 27; 25(5):400-10. PubMed ID: 18651318
    [Abstract] [Full Text] [Related]

  • 16. Alpha helix capping in synthetic model peptides by reciprocal side chain-main chain interactions: evidence for an N terminal "capping box".
    Zhou HX, Lyu P, Wemmer DE, Kallenbach NR.
    Proteins; 1994 Jan 27; 18(1):1-7. PubMed ID: 8146119
    [Abstract] [Full Text] [Related]

  • 17. Membrane-bound peptides from V-ATPase subunit a do not interact with an indole-type inhibitor.
    Hesselink RW, Fedorov A, Hemminga MA, Prieto M.
    J Pept Sci; 2008 Apr 27; 14(4):383-8. PubMed ID: 18069732
    [Abstract] [Full Text] [Related]

  • 18. The world of beta- and gamma-peptides comprised of homologated proteinogenic amino acids and other components.
    Seebach D, Beck AK, Bierbaum DJ.
    Chem Biodivers; 2004 Aug 27; 1(8):1111-239. PubMed ID: 17191902
    [Abstract] [Full Text] [Related]

  • 19. A 3(10)-helical pentapeptide in water: interplay of alpha,alpha-disubstituted amino acids and the central residue on structure formation.
    Wang J, McElheny D, Fu Y, Li G, Kim J, Zhou Z, Wu L, Keiderling TA, Hammer RP.
    Biopolymers; 2009 Aug 27; 92(5):452-64. PubMed ID: 19489061
    [Abstract] [Full Text] [Related]

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