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Journal Abstract Search

377 related items for PubMed ID: 18592190

  • 1. Toward high-throughput and reliable peptide identification via MS/MS spectra.
    Liu J.
    Methods Mol Biol; 2008; 484():333-44. PubMed ID: 18592190
    [Abstract] [Full Text] [Related]

  • 2. De novo sequencing methods in proteomics.
    Hughes C, Ma B, Lajoie GA.
    Methods Mol Biol; 2010; 604():105-21. PubMed ID: 20013367
    [Abstract] [Full Text] [Related]

  • 3. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
    Matthiesen R, Trelle MB, Højrup P, Bunkenborg J, Jensen ON.
    J Proteome Res; 2005; 4(6):2338-47. PubMed ID: 16335983
    [Abstract] [Full Text] [Related]

  • 4. Proteomics-grade de novo sequencing approach.
    Savitski MM, Nielsen ML, Kjeldsen F, Zubarev RA.
    J Proteome Res; 2005; 4(6):2348-54. PubMed ID: 16335984
    [Abstract] [Full Text] [Related]

  • 5. Software for computational peptide identification from MS-MS data.
    Xu C, Ma B.
    Drug Discov Today; 2006 Jul; 11(13-14):595-600. PubMed ID: 16793527
    [Abstract] [Full Text] [Related]

  • 6. PEAKS: powerful software for peptide de novo sequencing by tandem mass spectrometry.
    Ma B, Zhang K, Hendrie C, Liang C, Li M, Doherty-Kirby A, Lajoie G.
    Rapid Commun Mass Spectrom; 2003 Jul; 17(20):2337-42. PubMed ID: 14558135
    [Abstract] [Full Text] [Related]

  • 7. Quantify this! Report on a round table discussion on quantitative mass spectrometry in proteomics.
    Quadroni M, Ducret A, Stöcklin R.
    Proteomics; 2004 Aug; 4(8):2211-5. PubMed ID: 15274113
    [Abstract] [Full Text] [Related]

  • 8. Algorithms and tools for analysis and management of mass spectrometry data.
    Veltri P.
    Brief Bioinform; 2008 Mar; 9(2):144-55. PubMed ID: 18356204
    [Abstract] [Full Text] [Related]

  • 9. [A novel approach for peptide identification by tandem mass spectrometry].
    Sheng QH, Tang HX, Xie T, Wang LS, Ding DF.
    Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai); 2003 Aug; 35(8):734-40. PubMed ID: 12897969
    [Abstract] [Full Text] [Related]

  • 10. Protein and peptide identification algorithms using MS for use in high-throughput, automated pipelines.
    Shadforth I, Crowther D, Bessant C.
    Proteomics; 2005 Nov; 5(16):4082-95. PubMed ID: 16196103
    [Abstract] [Full Text] [Related]

  • 11. Computational approaches to peptide identification via tandem MS.
    Hubbard SJ.
    Methods Mol Biol; 2010 Nov; 604():23-42. PubMed ID: 20013362
    [Abstract] [Full Text] [Related]

  • 12. pFind 2.0: a software package for peptide and protein identification via tandem mass spectrometry.
    Wang LH, Li DQ, Fu Y, Wang HP, Zhang JF, Yuan ZF, Sun RX, Zeng R, He SM, Gao W.
    Rapid Commun Mass Spectrom; 2007 Nov; 21(18):2985-91. PubMed ID: 17702057
    [Abstract] [Full Text] [Related]

  • 13. CHOMPER: a bioinformatic tool for rapid validation of tandem mass spectrometry search results associated with high-throughput proteomic strategies.
    Eddes JS, Kapp EA, Frecklington DF, Connolly LM, Layton MJ, Moritz RL, Simpson RJ.
    Proteomics; 2002 Sep; 2(9):1097-103. PubMed ID: 12362328
    [Abstract] [Full Text] [Related]

  • 14. PepSOM: an algorithm for peptide identification by tandem mass spectrometry based on SOM.
    Ning K, Ng HK, Leong HW.
    Genome Inform; 2006 Sep; 17(2):194-205. PubMed ID: 17503392
    [Abstract] [Full Text] [Related]

  • 15. High-throughput identification of proteins and unanticipated sequence modifications using a mass-based alignment algorithm for MS/MS de novo sequencing results.
    Searle BC, Dasari S, Turner M, Reddy AP, Choi D, Wilmarth PA, McCormack AL, David LL, Nagalla SR.
    Anal Chem; 2004 Apr 15; 76(8):2220-30. PubMed ID: 15080731
    [Abstract] [Full Text] [Related]

  • 16. Improving mass and liquid chromatography based identification of proteins using bayesian scoring.
    Chen SS, Deutsch EW, Yi EC, Li XJ, Goodlett DR, Aebersold R.
    J Proteome Res; 2005 Apr 15; 4(6):2174-84. PubMed ID: 16335964
    [Abstract] [Full Text] [Related]

  • 17. swissPIT: a novel approach for pipelined analysis of mass spectrometry data.
    Quandt A, Hernandez P, Masselot A, Hernandez C, Maffioletti S, Pautasso C, Appel RD, Lisacek F.
    Bioinformatics; 2008 Jun 01; 24(11):1416-7. PubMed ID: 18436540
    [Abstract] [Full Text] [Related]

  • 18. Shotgun protein sequencing by tandem mass spectra assembly.
    Bandeira N, Tang H, Bafna V, Pevzner P.
    Anal Chem; 2004 Dec 15; 76(24):7221-33. PubMed ID: 15595863
    [Abstract] [Full Text] [Related]

  • 19. Intensity-based protein identification by machine learning from a library of tandem mass spectra.
    Elias JE, Gibbons FD, King OD, Roth FP, Gygi SP.
    Nat Biotechnol; 2004 Feb 15; 22(2):214-9. PubMed ID: 14730315
    [Abstract] [Full Text] [Related]

  • 20. Algorithms for the de novo sequencing of peptides from tandem mass spectra.
    Allmer J.
    Expert Rev Proteomics; 2011 Oct 15; 8(5):645-57. PubMed ID: 21999834
    [Abstract] [Full Text] [Related]

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