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Journal Abstract Search

575 related items for PubMed ID: 18592192

  • 21. FASTA-SWAP and FASTA-PAT: pattern database searches using combinations of aligned amino acids, and a novel scoring theory.
    Ladunga I, Wiese BA, Smith RF.
    J Mol Biol; 1996 Jun 21; 259(4):840-54. PubMed ID: 8683587
    [Abstract] [Full Text] [Related]

  • 22. Sequence and hydropathy profile analysis of two classes of secondary transporters.
    Lolkema JS, Slotboom DJ.
    Mol Membr Biol; 2005 Jun 21; 22(3):177-89. PubMed ID: 16096261
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  • 23. Incremental window-based protein sequence alignment algorithms.
    Rangwala H, Karypis G.
    Bioinformatics; 2007 Jan 15; 23(2):e17-23. PubMed ID: 17237087
    [Abstract] [Full Text] [Related]

  • 24. Tracembler--software for in-silico chromosome walking in unassembled genomes.
    Dong Q, Wilkerson MD, Brendel V.
    BMC Bioinformatics; 2007 May 09; 8():151. PubMed ID: 17490482
    [Abstract] [Full Text] [Related]

  • 25. A parallel pairwise local sequence alignment algorithm.
    Bandyopadhyay S, Mitra R.
    IEEE Trans Nanobioscience; 2009 Jun 09; 8(2):139-46. PubMed ID: 19366648
    [Abstract] [Full Text] [Related]

  • 26. Protein multiple sequence alignment.
    Do CB, Katoh K.
    Methods Mol Biol; 2008 Jun 09; 484():379-413. PubMed ID: 18592193
    [Abstract] [Full Text] [Related]

  • 27. Code optimization of the subroutine to remove near identical matches in the sequence database homology search tool PSI-BLAST.
    Aspnäs M, Mattila K, Osowski K, Westerholm J.
    J Comput Biol; 2010 Jun 09; 17(6):819-23. PubMed ID: 20583927
    [Abstract] [Full Text] [Related]

  • 28. PHOG-BLAST--a new generation tool for fast similarity search of protein families.
    Merkeev IV, Mironov AA.
    BMC Evol Biol; 2006 Jun 22; 6():51. PubMed ID: 16792802
    [Abstract] [Full Text] [Related]

  • 29. Inferring function from homology.
    Emes RD.
    Methods Mol Biol; 2008 Jun 22; 453():149-68. PubMed ID: 18712301
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  • 30. Practical and predictive bioinformatics methods for the identification of potentially cross-reactive protein matches.
    Goodman RE.
    Mol Nutr Food Res; 2006 Jul 22; 50(7):655-60. PubMed ID: 16810734
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  • 31. Use of multiple profiles corresponding to a sequence alignment enables effective detection of remote homologues.
    Anand B, Gowri VS, Srinivasan N.
    Bioinformatics; 2005 Jun 15; 21(12):2821-6. PubMed ID: 15817691
    [Abstract] [Full Text] [Related]

  • 32. PARALIGN: rapid and sensitive sequence similarity searches powered by parallel computing technology.
    Saebø PE, Andersen SM, Myrseth J, Laerdahl JK, Rognes T.
    Nucleic Acids Res; 2005 Jul 01; 33(Web Server issue):W535-9. PubMed ID: 15980529
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  • 33. Ancestral sequence alignment under optimal conditions.
    Hudek AK, Brown DG.
    BMC Bioinformatics; 2005 Nov 17; 6():273. PubMed ID: 16293191
    [Abstract] [Full Text] [Related]

  • 34. The WWWH of remote homolog detection: the state of the art.
    Fariselli P, Rossi I, Capriotti E, Casadio R.
    Brief Bioinform; 2007 Mar 17; 8(2):78-87. PubMed ID: 17003074
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  • 35. Detecting distant homologs using phylogenetic tree-based HMMs.
    Qian B, Goldstein RA.
    Proteins; 2003 Aug 15; 52(3):446-53. PubMed ID: 12866055
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  • 36. CAALIGN: a program for pairwise and multiple protein-structure alignment.
    Oldfield TJ.
    Acta Crystallogr D Biol Crystallogr; 2007 Apr 15; 63(Pt 4):514-25. PubMed ID: 17372357
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  • 37. Fast protein tertiary structure retrieval based on global surface shape similarity.
    Sael L, Li B, La D, Fang Y, Ramani K, Rustamov R, Kihara D.
    Proteins; 2008 Sep 15; 72(4):1259-73. PubMed ID: 18361455
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  • 38. Automatic generation and evaluation of sparse protein signatures for families of protein structural domains.
    Blades MJ, Ison JC, Ranasinghe R, Findlay JB.
    Protein Sci; 2005 Jan 15; 14(1):13-23. PubMed ID: 15608116
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  • 39. A feature vector integration approach for a generalized support vector machine pairwise homology algorithm.
    Webb-Robertson BJ, Oehmen CS, Shah AR.
    Comput Biol Chem; 2008 Dec 15; 32(6):458-61. PubMed ID: 18722814
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  • 40. Pairwise sequence alignment below the twilight zone.
    Blake JD, Cohen FE.
    J Mol Biol; 2001 Mar 23; 307(2):721-35. PubMed ID: 11254392
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