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Journal Abstract Search

85 related items for PubMed ID: 18689822

  • 1. ChIPmix: mixture model of regressions for two-color ChIP-chip analysis.
    Martin-Magniette ML, Mary-Huard T, Bérard C, Robin S.
    Bioinformatics; 2008 Aug 15; 24(16):i181-6. PubMed ID: 18689822
    [Abstract] [Full Text] [Related]

  • 2. ChIP-chip: data, model, and analysis.
    Zheng M, Barrera LO, Ren B, Wu YN.
    Biometrics; 2007 Sep 15; 63(3):787-96. PubMed ID: 17825010
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  • 3. Assessing the need for sequence-based normalization in tiling microarray experiments.
    Royce TE, Rozowsky JS, Gerstein MB.
    Bioinformatics; 2007 Apr 15; 23(8):988-97. PubMed ID: 17387113
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  • 4. rMAT--an R/Bioconductor package for analyzing ChIP-chip experiments.
    Droit A, Cheung C, Gottardo R.
    Bioinformatics; 2010 Mar 01; 26(5):678-9. PubMed ID: 20089513
    [Abstract] [Full Text] [Related]

  • 5. A signal-noise model for significance analysis of ChIP-seq with negative control.
    Xu H, Handoko L, Wei X, Ye C, Sheng J, Wei CL, Lin F, Sung WK.
    Bioinformatics; 2010 May 01; 26(9):1199-204. PubMed ID: 20371496
    [Abstract] [Full Text] [Related]

  • 6. Poisson approximation for significance in genome-wide ChIP-chip tiling arrays.
    Zhang Y.
    Bioinformatics; 2008 Dec 15; 24(24):2825-31. PubMed ID: 18953047
    [Abstract] [Full Text] [Related]

  • 7. High-resolution computational models of genome binding events.
    Qi Y, Rolfe A, MacIsaac KD, Gerber GK, Pokholok D, Zeitlinger J, Danford T, Dowell RD, Fraenkel E, Jaakkola TS, Young RA, Gifford DK.
    Nat Biotechnol; 2006 Aug 15; 24(8):963-70. PubMed ID: 16900145
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  • 12. Computational analysis and modeling of genome-scale avidity distribution of transcription factor binding sites in chip-pet experiments.
    Kuznetsov VA, Orlov YL, Wei CL, Ruan Y.
    Genome Inform; 2007 Aug 15; 19():83-94. PubMed ID: 18546507
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  • 17. Moderated statistical tests for assessing differences in tag abundance.
    Robinson MD, Smyth GK.
    Bioinformatics; 2007 Nov 01; 23(21):2881-7. PubMed ID: 17881408
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  • 18. Statistical methods in integrative analysis for gene regulatory modules.
    Zeng L, Wu J, Xie J.
    Stat Appl Genet Mol Biol; 2008 Nov 01; 7(1):Article 28. PubMed ID: 18976224
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  • 19. Genomewide identification of protein binding locations using chromatin immunoprecipitation coupled with microarray.
    Cho BK, Knight EM, Palsson BØ.
    Methods Mol Biol; 2008 Nov 01; 439():131-45. PubMed ID: 18370100
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  • 20. Modeling promoter grammars with evolving hidden Markov models.
    Won KJ, Sandelin A, Marstrand TT, Krogh A.
    Bioinformatics; 2008 Aug 01; 24(15):1669-75. PubMed ID: 18535083
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