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Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

307 related items for PubMed ID: 18689823

  • 1. Segment-based multiple sequence alignment.
    Rausch T, Emde AK, Weese D, Döring A, Notredame C, Reinert K.
    Bioinformatics; 2008 Aug 15; 24(16):i187-92. PubMed ID: 18689823
    [Abstract] [Full Text] [Related]

  • 2. The iRMSD: a local measure of sequence alignment accuracy using structural information.
    Armougom F, Moretti S, Keduas V, Notredame C.
    Bioinformatics; 2006 Jul 15; 22(14):e35-9. PubMed ID: 16873492
    [Abstract] [Full Text] [Related]

  • 3. Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise linear gap cost.
    Yamada S, Gotoh O, Yamana H.
    BMC Bioinformatics; 2006 Dec 01; 7():524. PubMed ID: 17137519
    [Abstract] [Full Text] [Related]

  • 4. PartTree: an algorithm to build an approximate tree from a large number of unaligned sequences.
    Katoh K, Toh H.
    Bioinformatics; 2007 Feb 01; 23(3):372-4. PubMed ID: 17118958
    [Abstract] [Full Text] [Related]

  • 5. The M-Coffee web server: a meta-method for computing multiple sequence alignments by combining alternative alignment methods.
    Moretti S, Armougom F, Wallace IM, Higgins DG, Jongeneel CV, Notredame C.
    Nucleic Acids Res; 2007 Jul 01; 35(Web Server issue):W645-8. PubMed ID: 17526519
    [Abstract] [Full Text] [Related]

  • 6. QOMA: quasi-optimal multiple alignment of protein sequences.
    Zhang X, Kahveci T.
    Bioinformatics; 2007 Jan 15; 23(2):162-8. PubMed ID: 17121778
    [Abstract] [Full Text] [Related]

  • 7. Murlet: a practical multiple alignment tool for structural RNA sequences.
    Kiryu H, Tabei Y, Kin T, Asai K.
    Bioinformatics; 2007 Jul 01; 23(13):1588-98. PubMed ID: 17459961
    [Abstract] [Full Text] [Related]

  • 8. T-Coffee: A novel method for fast and accurate multiple sequence alignment.
    Notredame C, Higgins DG, Heringa J.
    J Mol Biol; 2000 Sep 08; 302(1):205-17. PubMed ID: 10964570
    [Abstract] [Full Text] [Related]

  • 9. A local multiple alignment method for detection of non-coding RNA sequences.
    Tabei Y, Asai K.
    Bioinformatics; 2009 Jun 15; 25(12):1498-505. PubMed ID: 19376823
    [Abstract] [Full Text] [Related]

  • 10. An adaptive and iterative algorithm for refining multiple sequence alignment.
    Wang Y, Li KB.
    Comput Biol Chem; 2004 Apr 15; 28(2):141-8. PubMed ID: 15130542
    [Abstract] [Full Text] [Related]

  • 11. Multiple alignment by sequence annealing.
    Schwartz AS, Pachter L.
    Bioinformatics; 2007 Jan 15; 23(2):e24-9. PubMed ID: 17237099
    [Abstract] [Full Text] [Related]

  • 12. MicroRazerS: rapid alignment of small RNA reads.
    Emde AK, Grunert M, Weese D, Reinert K, Sperling SR.
    Bioinformatics; 2010 Jan 01; 26(1):123-4. PubMed ID: 19880369
    [Abstract] [Full Text] [Related]

  • 13. SITEBLAST--rapid and sensitive local alignment of genomic sequences employing motif anchors.
    Michael M, Dieterich C, Vingron M.
    Bioinformatics; 2005 May 01; 21(9):2093-4. PubMed ID: 15598827
    [Abstract] [Full Text] [Related]

  • 14. An iterative refinement algorithm for consistency based multiple structural alignment methods.
    Chen Y, Crippen GM.
    Bioinformatics; 2006 Sep 01; 22(17):2087-93. PubMed ID: 16809393
    [Abstract] [Full Text] [Related]

  • 15. A simple genetic algorithm for multiple sequence alignment.
    Gondro C, Kinghorn BP.
    Genet Mol Res; 2007 Oct 05; 6(4):964-82. PubMed ID: 18058716
    [Abstract] [Full Text] [Related]

  • 16. Improvement of alignment accuracy utilizing sequentially conserved motifs.
    Chakrabarti S, Bhardwaj N, Anand PA, Sowdhamini R.
    BMC Bioinformatics; 2004 Oct 28; 5():167. PubMed ID: 15509307
    [Abstract] [Full Text] [Related]

  • 17. Look-Align: an interactive web-based multiple sequence alignment viewer with polymorphism analysis support.
    Canaran P, Stein L, Ware D.
    Bioinformatics; 2006 Apr 01; 22(7):885-6. PubMed ID: 16473875
    [Abstract] [Full Text] [Related]

  • 18. ARCS: an aggregated related column scoring scheme for aligned sequences.
    Song B, Choi JH, Chen G, Szymanski J, Zhang GQ, Tung AK, Kang J, Kim S, Yang J.
    Bioinformatics; 2006 Oct 01; 22(19):2326-32. PubMed ID: 16870930
    [Abstract] [Full Text] [Related]

  • 19. 3DCoffee@igs: a web server for combining sequences and structures into a multiple sequence alignment.
    Poirot O, Suhre K, Abergel C, O'Toole E, Notredame C.
    Nucleic Acids Res; 2004 Jul 01; 32(Web Server issue):W37-40. PubMed ID: 15215345
    [Abstract] [Full Text] [Related]

  • 20. Expresso: automatic incorporation of structural information in multiple sequence alignments using 3D-Coffee.
    Armougom F, Moretti S, Poirot O, Audic S, Dumas P, Schaeli B, Keduas V, Notredame C.
    Nucleic Acids Res; 2006 Jul 01; 34(Web Server issue):W604-8. PubMed ID: 16845081
    [Abstract] [Full Text] [Related]

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