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Journal Abstract Search

390 related items for PubMed ID: 18725631

  • 1. Global alignment of multiple protein interaction networks with application to functional orthology detection.
    Singh R, Xu J, Berger B.
    Proc Natl Acad Sci U S A; 2008 Sep 02; 105(35):12763-8. PubMed ID: 18725631
    [Abstract] [Full Text] [Related]

  • 2.
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    [No Abstract] [Full Text] [Related]

  • 3. IsoBase: a database of functionally related proteins across PPI networks.
    Park D, Singh R, Baym M, Liao CS, Berger B.
    Nucleic Acids Res; 2011 Jan 02; 39(Database issue):D295-300. PubMed ID: 21177658
    [Abstract] [Full Text] [Related]

  • 4. Pairwise alignment of protein interaction networks.
    Koyutürk M, Kim Y, Topkara U, Subramaniam S, Szpankowski W, Grama A.
    J Comput Biol; 2006 Mar 02; 13(2):182-99. PubMed ID: 16597234
    [Abstract] [Full Text] [Related]

  • 5. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
    Maskey S, Cho YR.
    BMC Genomics; 2019 Dec 24; 20(Suppl 9):964. PubMed ID: 31874635
    [Abstract] [Full Text] [Related]

  • 6. Protein interaction networks of Saccharomyces cerevisiae, Caenorhabditis elegans and Drosophila melanogaster: large-scale organization and robustness.
    Li D, Li J, Ouyang S, Wang J, Wu S, Wan P, Zhu Y, Xu X, He F.
    Proteomics; 2006 Jan 24; 6(2):456-61. PubMed ID: 16317777
    [Abstract] [Full Text] [Related]

  • 7. ClusterM: a scalable algorithm for computational prediction of conserved protein complexes across multiple protein interaction networks.
    Wang Y, Jeong H, Yoon BJ, Qian X.
    BMC Genomics; 2020 Nov 18; 21(Suppl 10):615. PubMed ID: 33208103
    [Abstract] [Full Text] [Related]

  • 8. Global alignment of protein-protein interaction networks.
    Mongiovì M, Sharan R.
    Methods Mol Biol; 2013 Nov 18; 939():21-34. PubMed ID: 23192538
    [Abstract] [Full Text] [Related]

  • 9. Global Biological Network Alignment by Using Efficient Memetic Algorithm.
    Maoguo Gong, Zhenglin Peng, Lijia Ma, Jiaxiang Huang.
    IEEE/ACM Trans Comput Biol Bioinform; 2016 Nov 18; 13(6):1117-1129. PubMed ID: 28055895
    [Abstract] [Full Text] [Related]

  • 10. Systems biology approach reveals possible evolutionarily conserved moonlighting functions for enolase.
    Paludo GP, Lorenzatto KR, Bonatto D, Ferreira HB.
    Comput Biol Chem; 2015 Oct 18; 58():1-8. PubMed ID: 25978602
    [Abstract] [Full Text] [Related]

  • 11. HubAlign: an accurate and efficient method for global alignment of protein-protein interaction networks.
    Hashemifar S, Xu J.
    Bioinformatics; 2014 Sep 01; 30(17):i438-44. PubMed ID: 25161231
    [Abstract] [Full Text] [Related]

  • 12. A fast approach to global alignment of protein-protein interaction networks.
    Kollias G, Sathe M, Mohammadi S, Grama A.
    BMC Res Notes; 2013 Jan 31; 6():35. PubMed ID: 23363457
    [Abstract] [Full Text] [Related]

  • 13. Identification of conserved protein complexes by module alignment.
    Sun PG, Gao L, Song J.
    Int J Data Min Bioinform; 2011 Jan 31; 5(6):593-610. PubMed ID: 22295746
    [Abstract] [Full Text] [Related]

  • 14. ConnectedAlign: a PPI network alignment method for identifying conserved protein complexes across multiple species.
    Gao J, Song B, Hu X, Yan F, Wang J.
    BMC Bioinformatics; 2018 Aug 13; 19(Suppl 9):286. PubMed ID: 30367584
    [Abstract] [Full Text] [Related]

  • 15. Global alignment of protein-protein interaction networks by graph matching methods.
    Zaslavskiy M, Bach F, Vert JP.
    Bioinformatics; 2009 Jun 15; 25(12):i259-67. PubMed ID: 19477997
    [Abstract] [Full Text] [Related]

  • 16. GreedyPlus: An Algorithm for the Alignment of Interface Interaction Networks.
    Law B, Bader GD.
    Sci Rep; 2015 Jul 13; 5():12074. PubMed ID: 26165520
    [Abstract] [Full Text] [Related]

  • 17. Using indirect protein interactions for the prediction of Gene Ontology functions.
    Chua HN, Sung WK, Wong L.
    BMC Bioinformatics; 2007 May 22; 8 Suppl 4(Suppl 4):S8. PubMed ID: 17570151
    [Abstract] [Full Text] [Related]

  • 18. A methodology for detecting the orthology signal in a PPI network at a functional complex level.
    Jancura P, Mavridou E, Carrillo-de Santa Pau E, Marchiori E.
    BMC Bioinformatics; 2012 Jun 25; 13 Suppl 10(Suppl 10):S18. PubMed ID: 22759423
    [Abstract] [Full Text] [Related]

  • 19. SAlign-a structure aware method for global PPI network alignment.
    Ayub U, Haider I, Naveed H.
    BMC Bioinformatics; 2020 Nov 04; 21(1):500. PubMed ID: 33148180
    [Abstract] [Full Text] [Related]

  • 20. Reciprocal Perspective for Improved Protein-Protein Interaction Prediction.
    Dick K, Green JR.
    Sci Rep; 2018 Aug 03; 8(1):11694. PubMed ID: 30076341
    [Abstract] [Full Text] [Related]

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