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243 related items for PubMed ID: 18817865

  • 1. Proteome-wide prediction of PKA phosphorylation sites in eukaryotic kingdom.
    Gao X, Jin C, Ren J, Yao X, Xue Y.
    Genomics; 2008 Dec; 92(6):457-63. PubMed ID: 18817865
    [Abstract] [Full Text] [Related]

  • 2. Caenorhabditis elegans has a phosphoproteome atypical for metazoans that is enriched in developmental and sex determination proteins.
    Zielinska DF, Gnad F, Jedrusik-Bode M, Wiśniewski JR, Mann M.
    J Proteome Res; 2009 Aug; 8(8):4039-49. PubMed ID: 19530675
    [Abstract] [Full Text] [Related]

  • 3. Phosphorylation of Rho-associated kinase (Rho-kinase/ROCK/ROK) substrates by protein kinases A and C.
    Kang JH, Jiang Y, Toita R, Oishi J, Kawamura K, Han A, Mori T, Niidome T, Ishida M, Tatematsu K, Tanizawa K, Katayama Y.
    Biochimie; 2007 Jan; 89(1):39-47. PubMed ID: 16996192
    [Abstract] [Full Text] [Related]

  • 4. Structural basis and prediction of substrate specificity in protein serine/threonine kinases.
    Brinkworth RI, Breinl RA, Kobe B.
    Proc Natl Acad Sci U S A; 2003 Jan 07; 100(1):74-9. PubMed ID: 12502784
    [Abstract] [Full Text] [Related]

  • 5. Comprehensive and reliable phosphorylation site mapping of individual phosphoproteins by combination of multiple stage mass spectrometric analysis with a target-decoy database search.
    Han G, Ye M, Jiang X, Chen R, Ren J, Xue Y, Wang F, Song C, Yao X, Zou H.
    Anal Chem; 2009 Jul 15; 81(14):5794-805. PubMed ID: 19522514
    [Abstract] [Full Text] [Related]

  • 6. GPS: a novel group-based phosphorylation predicting and scoring method.
    Zhou FF, Xue Y, Chen GL, Yao X.
    Biochem Biophys Res Commun; 2004 Dec 24; 325(4):1443-8. PubMed ID: 15555589
    [Abstract] [Full Text] [Related]

  • 7. Molecular mechanisms controlling the localisation of protein kinase A.
    Griffioen G, Thevelein JM.
    Curr Genet; 2002 Jul 24; 41(4):199-207. PubMed ID: 12172960
    [Abstract] [Full Text] [Related]

  • 8. Ndel1 alters its conformation by sequestering cAMP-specific phosphodiesterase-4D3 (PDE4D3) in a manner that is dynamically regulated through Protein Kinase A (PKA).
    Collins DM, Murdoch H, Dunlop AJ, Charych E, Baillie GS, Wang Q, Herberg FW, Brandon N, Prinz A, Houslay MD.
    Cell Signal; 2008 Dec 24; 20(12):2356-69. PubMed ID: 18845247
    [Abstract] [Full Text] [Related]

  • 9. Global analysis of protein phosphorylation in yeast.
    Ptacek J, Devgan G, Michaud G, Zhu H, Zhu X, Fasolo J, Guo H, Jona G, Breitkreutz A, Sopko R, McCartney RR, Schmidt MC, Rachidi N, Lee SJ, Mah AS, Meng L, Stark MJ, Stern DF, De Virgilio C, Tyers M, Andrews B, Gerstein M, Schweitzer B, Predki PF, Snyder M.
    Nature; 2005 Dec 01; 438(7068):679-84. PubMed ID: 16319894
    [Abstract] [Full Text] [Related]

  • 10. Systematic analysis of protein phosphorylation networks from phosphoproteomic data.
    Song C, Ye M, Liu Z, Cheng H, Jiang X, Han G, Songyang Z, Tan Y, Wang H, Ren J, Xue Y, Zou H.
    Mol Cell Proteomics; 2012 Oct 01; 11(10):1070-83. PubMed ID: 22798277
    [Abstract] [Full Text] [Related]

  • 11. Online automated in vivo zebrafish phosphoproteomics: from large-scale analysis down to a single embryo.
    Lemeer S, Pinkse MW, Mohammed S, van Breukelen B, den Hertog J, Slijper M, Heck AJ.
    J Proteome Res; 2008 Apr 01; 7(4):1555-64. PubMed ID: 18307296
    [Abstract] [Full Text] [Related]

  • 12. pkaPS: prediction of protein kinase A phosphorylation sites with the simplified kinase-substrate binding model.
    Neuberger G, Schneider G, Eisenhaber F.
    Biol Direct; 2007 Jan 12; 2():1. PubMed ID: 17222345
    [Abstract] [Full Text] [Related]

  • 13. A systematic MS-based approach for identifying in vitro substrates of PKA and PKG in rat uteri.
    Huang SY, Tsai ML, Chen GY, Wu CJ, Chen SH.
    J Proteome Res; 2007 Jul 12; 6(7):2674-84. PubMed ID: 17564427
    [Abstract] [Full Text] [Related]

  • 14. Phospho.ELM: a database of experimentally verified phosphorylation sites in eukaryotic proteins.
    Diella F, Cameron S, Gemünd C, Linding R, Via A, Kuster B, Sicheritz-Pontén T, Blom N, Gibson TJ.
    BMC Bioinformatics; 2004 Jun 22; 5():79. PubMed ID: 15212693
    [Abstract] [Full Text] [Related]

  • 15. Specific processing of native and phosphorylated tau protein by proteases.
    Wang X, An S, Wu JM.
    Biochem Biophys Res Commun; 1996 Feb 15; 219(2):591-7. PubMed ID: 8605032
    [Abstract] [Full Text] [Related]

  • 16. Phosphoproteome sequence analysis and significance: mining association patterns around phosphorylation sites utilizing MAPRes.
    Ahmad I, Mehmood A, Khurshid A, Qazi WM, Hoessli DC, Walker-Nasir E, Shakoori AR, Nasir-ud-Din.
    J Cell Biochem; 2009 Sep 01; 108(1):64-74. PubMed ID: 19544398
    [Abstract] [Full Text] [Related]

  • 17. Universal quantitative kinase assay based on diagonal SCX chromatography and stable isotope dimethyl labeling provides high-definition kinase consensus motifs for PKA and human Mps1.
    Hennrich ML, Marino F, Groenewold V, Kops GJ, Mohammed S, Heck AJ.
    J Proteome Res; 2013 May 03; 12(5):2214-24. PubMed ID: 23510141
    [Abstract] [Full Text] [Related]

  • 18. PPSP: prediction of PK-specific phosphorylation site with Bayesian decision theory.
    Xue Y, Li A, Wang L, Feng H, Yao X.
    BMC Bioinformatics; 2006 Mar 20; 7():163. PubMed ID: 16549034
    [Abstract] [Full Text] [Related]

  • 19. Tyrosine phosphoproteomics and identification of substrates of protein tyrosine phosphatase dPTP61F in Drosophila S2 cells by mass spectrometry-based substrate trapping strategy.
    Chang YC, Lin SY, Liang SY, Pan KT, Chou CC, Chen CH, Liao CL, Khoo KH, Meng TC.
    J Proteome Res; 2008 Mar 20; 7(3):1055-66. PubMed ID: 18281928
    [Abstract] [Full Text] [Related]

  • 20. Prediction of kinase-specific phosphorylation sites through an integrative model of protein context and sequence.
    Patrick R, Horin C, Kobe B, Cao KA, Bodén M.
    Biochim Biophys Acta; 2016 Nov 20; 1864(11):1599-608. PubMed ID: 27507704
    [Abstract] [Full Text] [Related]

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