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Journal Abstract Search


59 related items for PubMed ID: 18954001

  • 1. [A comparative analysis of the binding sites of proteins regulating the transcription in the early development of Drosophila melanogaster, determined by the ChIP-chip method and the theoretically predicted clusters of the binding sites of these proteins].
    Polishchuk MS, Heinzel A, Favorov AV, Makeev IuV.
    Biofizika; 2008; 53(5):754-7. PubMed ID: 18954001
    [Abstract] [Full Text] [Related]

  • 2. [Correlations between clusters of protein-DNA binding sites and the binding experimental data allow to predict a structure of regulatory modules].
    Nikulova AA, Polishchuk MS, Tumanian VG, Makeev VIu, Mironov AA, Favorov AV.
    Biofizika; 2012; 57(2):212-4. PubMed ID: 22594275
    [Abstract] [Full Text] [Related]

  • 3. Mapping the distribution of chromatin proteins by ChIP on chip.
    Nègre N, Lavrov S, Hennetin J, Bellis M, Cavalli G.
    Methods Enzymol; 2006; 410():316-41. PubMed ID: 16938558
    [Abstract] [Full Text] [Related]

  • 4. [Integration of data obtained by different experimental methods to determine the motifs in DNA sequences recognized by transcription-regulating factors].
    Kulakovskiĭ IV, Makeev VIu.
    Biofizika; 2009; 54(6):965-74. PubMed ID: 20067172
    [Abstract] [Full Text] [Related]

  • 5. MSL complex associates with clusters of actively transcribed genes along the Drosophila male X chromosome.
    Larschan E, Alekseyenko AA, Lai WR, Park PJ, Kuroda MI.
    Cold Spring Harb Symp Quant Biol; 2006; 71():385-94. PubMed ID: 17381321
    [Abstract] [Full Text] [Related]

  • 6. ChIP-chip: data, model, and analysis.
    Zheng M, Barrera LO, Ren B, Wu YN.
    Biometrics; 2007 Sep; 63(3):787-96. PubMed ID: 17825010
    [Abstract] [Full Text] [Related]

  • 7. Boundary element-associated factor 32B connects chromatin domains to the nuclear matrix.
    Pathak RU, Rangaraj N, Kallappagoudar S, Mishra K, Mishra RK.
    Mol Cell Biol; 2007 Jul; 27(13):4796-806. PubMed ID: 17485444
    [Abstract] [Full Text] [Related]

  • 8. Analyzing transcription factor occupancy during embryo development using ChIP-seq.
    Ghavi-Helm Y, Furlong EE.
    Methods Mol Biol; 2012 Jul; 786():229-45. PubMed ID: 21938630
    [Abstract] [Full Text] [Related]

  • 9. NsrR targets in the Escherichia coli genome: new insights into DNA sequence requirements for binding and a role for NsrR in the regulation of motility.
    Partridge JD, Bodenmiller DM, Humphrys MS, Spiro S.
    Mol Microbiol; 2009 Aug; 73(4):680-94. PubMed ID: 19656291
    [Abstract] [Full Text] [Related]

  • 10. Spatial distribution of predicted transcription factor binding sites in Drosophila ChIP peaks.
    Pettie KP, Dresch JM, Drewell RA.
    Mech Dev; 2016 Aug; 141():51-61. PubMed ID: 27264535
    [Abstract] [Full Text] [Related]

  • 11. Independent transcription of miR-281 in the intron of ODA in Drosophila melanogaster.
    Xiong H, Qian J, He T, Li F.
    Biochem Biophys Res Commun; 2009 Jan 23; 378(4):883-9. PubMed ID: 19073139
    [Abstract] [Full Text] [Related]

  • 12. ChIP-on-chip protocol for genome-wide analysis of transcription factor binding in Drosophila melanogaster embryos.
    Sandmann T, Jakobsen JS, Furlong EE.
    Nat Protoc; 2006 Jan 23; 1(6):2839-55. PubMed ID: 17406543
    [Abstract] [Full Text] [Related]

  • 13. An integrated workflow for analysis of ChIP-chip data.
    Weigelt K, Moehle C, Stempfl T, Weber B, Langmann T.
    Biotechniques; 2008 Aug 23; 45(2):131-2, 134, 136 passim. PubMed ID: 18687062
    [Abstract] [Full Text] [Related]

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  • 16. A graph model based study on regulatory impacts of transcription factors of Drosophila melanogaster and comparison across species.
    Tian F, Chen J, Bao S, Shi L, Liu X, Grossman R.
    Biochem Biophys Res Commun; 2009 Sep 04; 386(4):559-62. PubMed ID: 19538943
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  • 19. Analysis of Chromatin Interactions Mediated by Specific Architectural Proteins in Drosophila Cells.
    Ando-Kuri M, Rivera ISM, Rowley MJ, Corces VG.
    Methods Mol Biol; 2018 Sep 04; 1766():239-256. PubMed ID: 29605857
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