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Journal Abstract Search

340 related items for PubMed ID: 18983726

  • 1. Specifications of insilicoML 1.0: a multilevel biophysical model description language.
    Asai Y, Suzuki Y, Kido Y, Oka H, Heien E, Nakanishi M, Urai T, Hagihara K, Kurachi Y, Nomura T.
    J Physiol Sci; 2008 Dec; 58(7):447-58. PubMed ID: 18983726
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  • 2. The IUPS Physiome Project: a framework for computational physiology.
    Hunter PJ.
    Prog Biophys Mol Biol; 2004 Dec; 85(2-3):551-69. PubMed ID: 15142761
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  • 3. A model diagram layout extension for SBML.
    Gauges R, Rost U, Sahle S, Wegner K.
    Bioinformatics; 2006 Aug 01; 22(15):1879-85. PubMed ID: 16709586
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  • 4. Design of a description language for generating wrapper to collect biological data.
    Lim M, Chung M, Bae M, Park S.
    Bioinformatics; 2005 Sep 01; 21 Suppl 2():ii31-2. PubMed ID: 16204120
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  • 5. A data integration approach for cell cycle analysis oriented to model simulation in systems biology.
    Alfieri R, Merelli I, Mosca E, Milanesi L.
    BMC Syst Biol; 2007 Aug 01; 1():35. PubMed ID: 17678529
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  • 6. An on demand data integration model for biological databases.
    Palakal M, Naidu P.
    Int J Data Min Bioinform; 2009 Aug 01; 3(1):40-54. PubMed ID: 19432375
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  • 7. A platform for in silico modeling of physiological systems II. CellML compatibility and other extended capabilities.
    Suzuki Y, Asai Y, Kawazu T, Nakanishi M, Taniguchi Y, Heien E, Hagihara K, Kurachi Y, Nomura T.
    Annu Int Conf IEEE Eng Med Biol Soc; 2008 Aug 01; 2008():573-6. PubMed ID: 19162720
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  • 8. XML for data representation and model specification in neuroscience.
    Crook SM, Howell FW.
    Methods Mol Biol; 2007 Aug 01; 401():53-66. PubMed ID: 18368360
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  • 9. Representing, storing and accessing molecular interaction data: a review of models and tools.
    Strömbäck L, Jakoniene V, Tan H, Lambrix P.
    Brief Bioinform; 2006 Dec 01; 7(4):331-8. PubMed ID: 17132622
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  • 10. A platform for in silico modeling of physiological systems III.
    Suzuki Y, Asai Y, Oka H, Heien E, Urai T, Okamoto T, Yumikura Y, Tominaga K, Kido Y, Nakanishi M, Hagihara K, Kurachi Y, Nomura T.
    Annu Int Conf IEEE Eng Med Biol Soc; 2009 Dec 01; 2009():2803-6. PubMed ID: 19964264
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  • 11. Interface analysis between GSVML and HL7 version 3.
    Hiroi K, Ido K, Yang W, Nakaya J.
    J Biomed Inform; 2007 Oct 01; 40(5):527-38. PubMed ID: 17293166
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  • 12. Integration from proteins to organs: the IUPS Physiome Project.
    Hunter P, Smith N, Fernandez J, Tawhai M.
    Mech Ageing Dev; 2005 Jan 01; 126(1):187-92. PubMed ID: 15610778
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  • 13. Supporting SBML as a model exchange format in software applications.
    Keating SM, Le Novère N.
    Methods Mol Biol; 2013 Jan 01; 1021():201-25. PubMed ID: 23715987
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  • 14. SBMLToolbox: an SBML toolbox for MATLAB users.
    Keating SM, Bornstein BJ, Finney A, Hucka M.
    Bioinformatics; 2006 May 15; 22(10):1275-7. PubMed ID: 16574696
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  • 15. Model storage, exchange and integration.
    Le Novère N.
    BMC Neurosci; 2006 Oct 30; 7 Suppl 1(Suppl 1):S11. PubMed ID: 17118155
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  • 16. CELLULAR OPEN RESOURCE (COR): current status and future directions.
    Garny A, Noble D, Hunter PJ, Kohl P.
    Philos Trans A Math Phys Eng Sci; 2009 May 28; 367(1895):1885-905. PubMed ID: 19380317
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  • 17. CellFrame: a data structure for abstraction of cell biology experiments and construction of perturbation networks.
    Gong Y, Zhang Z.
    Ann N Y Acad Sci; 2007 Dec 28; 1115():249-66. PubMed ID: 17925354
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  • 18. Interoperability with Moby 1.0--it's better than sharing your toothbrush!
    BioMoby Consortium, Wilkinson MD, Senger M, Kawas E, Bruskiewich R, Gouzy J, Noirot C, Bardou P, Ng A, Haase D, Saiz Ede A, Wang D, Gibbons F, Gordon PM, Sensen CW, Carrasco JM, Fernández JM, Shen L, Links M, Ng M, Opushneva N, Neerincx PB, Leunissen JA, Ernst R, Twigger S, Usadel B, Good B, Wong Y, Stein L, Crosby W, Karlsson J, Royo R, Párraga I, Ramírez S, Gelpi JL, Trelles O, Pisano DG, Jimenez N, Kerhornou A, Rosset R, Zamacola L, Tarraga J, Huerta-Cepas J, Carazo JM, Dopazo J, Guigo R, Navarro A, Orozco M, Valencia A, Claros MG, Pérez AJ, Aldana J, Rojano M, Fernandez-Santa Cruz R, Navas I, Schiltz G, Farmer A, Gessler D, Schoof H, Groscurth A.
    Brief Bioinform; 2008 May 28; 9(3):220-31. PubMed ID: 18238804
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  • 19. How granularity issues concern biomedical ontology integration.
    Schulz S, Boeker M, Stenzhorn H.
    Stud Health Technol Inform; 2008 May 28; 136():863-8. PubMed ID: 18487840
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  • 20. Mediator infrastructure for information integration and semantic data integration environment for biomedical research.
    Grethe JS, Ross E, Little D, Sanders B, Gupta A, Astakhov V.
    Methods Mol Biol; 2009 May 28; 569():33-53. PubMed ID: 19623485
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