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Journal Abstract Search

116 related items for PubMed ID: 19072580

  • 1. Stable structure-approximating inverse protein folding in 2D hydrophobic-polar-cysteine (HPC) model.
    Khodabakhshi AH, Manuch J, Rafiey A, Gupta A.
    J Comput Biol; 2009 Jan; 16(1):19-30. PubMed ID: 19072580
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  • 2. Inverse protein folding in 3D hexagonal prism lattice under HPC model.
    Khodabakhshi AH, Manuch J, Rafiey A, Gupta A.
    J Comput Biol; 2009 Jun; 16(6):769-802. PubMed ID: 19522663
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  • 4. Inverse protein folding in 2D HP mode (extended abstract).
    Gupta A, Manuch J, Stacho L.
    Proc IEEE Comput Syst Bioinform Conf; 2004 Jun; ():311-8. PubMed ID: 16448024
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  • 8. Protein stability and plasticity of the hydrophobic cavity in wheat ns-LTP.
    Sy D, Le Gravier Y, Goodfellow J, Vovelle F.
    J Biomol Struct Dyn; 2003 Aug; 21(1):15-29. PubMed ID: 12854956
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  • 10. Local rules for protein folding on a triangular lattice and generalized hydrophobicity in the HP model.
    Agarwala R, Batzoglou S, Dancík V, Decatur SE, Hannenhalli S, Farach M, Muthukrishnan S, Skiena S.
    J Comput Biol; 1997 Aug; 4(3):275-96. PubMed ID: 9278060
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  • 11. Computational Modeling of Proteins based on Cellular Automata: A Method of HP Folding Approximation.
    Madain A, Abu Dalhoum AL, Sleit A.
    Protein J; 2018 Jun; 37(3):248-260. PubMed ID: 29802509
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  • 12. Improving coarse-grained models of protein folding through weighting of polar-polar/hydrophobic-hydrophobic interactions into crowded spaces.
    Beltrán HI, Alas-Guardado SJ, González-Pérez PP.
    J Mol Model; 2022 Mar 09; 28(4):87. PubMed ID: 35262807
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  • 15. An effective exact algorithm and a new upper bound for the number of contacts in the hydrophobic-polar two-dimensional lattice model.
    Giaquinta E, Pozzi L.
    J Comput Biol; 2013 Aug 09; 20(8):593-609. PubMed ID: 23899013
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  • 19. Entropy reduction effect imposed by hydrogen bond formation on protein folding cooperativity: evidence from a hydrophobic minimalist model.
    Barbosa MA, Garcia LG, Pereira de Araújo AF.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2005 Nov 09; 72(5 Pt 1):051903. PubMed ID: 16383641
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