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Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

151 related items for PubMed ID: 19090017

  • 1. A linear-time algorithm for predicting functional annotations from PPI networks.
    Wu Y, Lonardi S.
    J Bioinform Comput Biol; 2008 Dec; 6(6):1049-65. PubMed ID: 19090017
    [Abstract] [Full Text] [Related]

  • 2. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
    Maskey S, Cho YR.
    BMC Genomics; 2019 Dec 24; 20(Suppl 9):964. PubMed ID: 31874635
    [Abstract] [Full Text] [Related]

  • 3. Learning the structure of protein-protein interaction networks.
    Kuchaiev O, Przulj N.
    Pac Symp Biocomput; 2009 Dec 24; ():39-50. PubMed ID: 19209694
    [Abstract] [Full Text] [Related]

  • 4. t-LSE: a novel robust geometric approach for modeling protein-protein interaction networks.
    Zhu L, You ZH, Huang DS, Wang B.
    PLoS One; 2013 Dec 24; 8(4):e58368. PubMed ID: 23560036
    [Abstract] [Full Text] [Related]

  • 5. Global alignment of multiple protein interaction networks.
    Singh R, Xu J, Berger B.
    Pac Symp Biocomput; 2008 Dec 24; ():303-14. PubMed ID: 18229695
    [Abstract] [Full Text] [Related]

  • 6. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
    Theofilatos K, Pavlopoulou N, Papasavvas C, Likothanassis S, Dimitrakopoulos C, Georgopoulos E, Moschopoulos C, Mavroudi S.
    Artif Intell Med; 2015 Mar 24; 63(3):181-9. PubMed ID: 25765008
    [Abstract] [Full Text] [Related]

  • 7. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Mar 24; 11(4):616-27. PubMed ID: 26356332
    [Abstract] [Full Text] [Related]

  • 8. Maximum likelihood inference of the evolutionary history of a PPI network from the duplication history of its proteins.
    Li S, Choi KP, Wu T, Zhang L.
    IEEE/ACM Trans Comput Biol Bioinform; 2013 Mar 24; 10(6):1412-21. PubMed ID: 24407300
    [Abstract] [Full Text] [Related]

  • 9. Identification of functional modules in a PPI network by bounded diameter clustering.
    Sohaee N, Forst CV.
    J Bioinform Comput Biol; 2010 Dec 24; 8(6):929-43. PubMed ID: 21121019
    [Abstract] [Full Text] [Related]

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  • 12. Using PPI network autocorrelation in hierarchical multi-label classification trees for gene function prediction.
    Stojanova D, Ceci M, Malerba D, Dzeroski S.
    BMC Bioinformatics; 2013 Sep 26; 14():285. PubMed ID: 24070402
    [Abstract] [Full Text] [Related]

  • 13. Pairwise alignment of protein interaction networks.
    Koyutürk M, Kim Y, Topkara U, Subramaniam S, Szpankowski W, Grama A.
    J Comput Biol; 2006 Mar 26; 13(2):182-99. PubMed ID: 16597234
    [Abstract] [Full Text] [Related]

  • 14. Using search engine technology for protein function prediction.
    Chen Z, Cai Z, Li M, Liu B.
    Int J Bioinform Res Appl; 2011 Mar 26; 7(1):101-13. PubMed ID: 21441099
    [Abstract] [Full Text] [Related]

  • 15. From communities to protein complexes: A local community detection algorithm on PPI networks.
    Dilmaghani S, Brust MR, Ribeiro CHC, Kieffer E, Danoy G, Bouvry P.
    PLoS One; 2022 Mar 26; 17(1):e0260484. PubMed ID: 35085263
    [Abstract] [Full Text] [Related]

  • 16. Geometric evolutionary dynamics of protein interaction networks.
    Przulj N, Kuchaiev O, Stevanović A, Hayes W.
    Pac Symp Biocomput; 2010 Mar 26; ():178-89. PubMed ID: 19908370
    [Abstract] [Full Text] [Related]

  • 17. Structure discovery in PPI networks using pattern-based network decomposition.
    Bachman P, Liu Y.
    Bioinformatics; 2009 Jul 15; 25(14):1814-21. PubMed ID: 19447784
    [Abstract] [Full Text] [Related]

  • 18. Protein interaction networks of Saccharomyces cerevisiae, Caenorhabditis elegans and Drosophila melanogaster: large-scale organization and robustness.
    Li D, Li J, Ouyang S, Wang J, Wu S, Wan P, Zhu Y, Xu X, He F.
    Proteomics; 2006 Jan 15; 6(2):456-61. PubMed ID: 16317777
    [Abstract] [Full Text] [Related]

  • 19. C-element: a new clustering algorithm to find high quality functional modules in PPI networks.
    Ghasemi M, Rahgozar M, Bidkhori G, Masoudi-Nejad A.
    PLoS One; 2013 Jan 15; 8(9):e72366. PubMed ID: 24039752
    [Abstract] [Full Text] [Related]

  • 20. Predicting overlapping protein complexes from weighted protein interaction graphs by gradually expanding dense neighborhoods.
    Dimitrakopoulos C, Theofilatos K, Pegkas A, Likothanassis S, Mavroudi S.
    Artif Intell Med; 2016 Jul 15; 71():62-9. PubMed ID: 27506132
    [Abstract] [Full Text] [Related]

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