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Pubmed for Handhelds

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Journal Abstract Search

458 related items for PubMed ID: 19129212

  • 1. Prequips--an extensible software platform for integration, visualization and analysis of LC-MS/MS proteomics data.
    Gehlenborg N, Yan W, Lee IY, Yoo H, Nieselt K, Hwang D, Aebersold R, Hood L.
    Bioinformatics; 2009 Mar 01; 25(5):682-3. PubMed ID: 19129212
    [Abstract] [Full Text] [Related]

  • 2. Corra: Computational framework and tools for LC-MS discovery and targeted mass spectrometry-based proteomics.
    Brusniak MY, Bodenmiller B, Campbell D, Cooke K, Eddes J, Garbutt A, Lau H, Letarte S, Mueller LN, Sharma V, Vitek O, Zhang N, Aebersold R, Watts JD.
    BMC Bioinformatics; 2008 Dec 16; 9():542. PubMed ID: 19087345
    [Abstract] [Full Text] [Related]

  • 3. A graphical user interface for RAId, a knowledge integrated proteomics analysis suite with accurate statistics.
    Joyce B, Lee D, Rubio A, Ogurtsov A, Alves G, Yu YK.
    BMC Res Notes; 2018 Mar 15; 11(1):182. PubMed ID: 29544540
    [Abstract] [Full Text] [Related]

  • 4. Intellinsity: a tool for visualization and analysis of liquid chromatography/tandem mass spectrometry sampling events.
    Xia Q, Good DM, Wenger CD, Coon JJ.
    Rapid Commun Mass Spectrom; 2010 Nov 15; 24(21):3217-8. PubMed ID: 20941771
    [No Abstract] [Full Text] [Related]

  • 5. The APEX Quantitative Proteomics Tool: generating protein quantitation estimates from LC-MS/MS proteomics results.
    Braisted JC, Kuntumalla S, Vogel C, Marcotte EM, Rodrigues AR, Wang R, Huang ST, Ferlanti ES, Saeed AI, Fleischmann RD, Peterson SN, Pieper R.
    BMC Bioinformatics; 2008 Dec 09; 9():529. PubMed ID: 19068132
    [Abstract] [Full Text] [Related]

  • 6. YPED: an integrated bioinformatics suite and database for mass spectrometry-based proteomics research.
    Colangelo CM, Shifman M, Cheung KH, Stone KL, Carriero NJ, Gulcicek EE, Lam TT, Wu T, Bjornson RD, Bruce C, Nairn AC, Rinehart J, Miller PL, Williams KR.
    Genomics Proteomics Bioinformatics; 2015 Feb 09; 13(1):25-35. PubMed ID: 25712262
    [Abstract] [Full Text] [Related]

  • 7. LFQuant: a label-free fast quantitative analysis tool for high-resolution LC-MS/MS proteomics data.
    Zhang W, Zhang J, Xu C, Li N, Liu H, Ma J, Zhu Y, Xie H.
    Proteomics; 2012 Dec 09; 12(23-24):3475-84. PubMed ID: 23081734
    [Abstract] [Full Text] [Related]

  • 8. KYSS: mass spectrometry data quality assessment for protein analysis and large-scale proteomics.
    Such-Sanmartín G, Sidoli S, Ventura-Espejo E, Jensen ON.
    Biochem Biophys Res Commun; 2014 Mar 21; 445(4):702-7. PubMed ID: 24480439
    [Abstract] [Full Text] [Related]

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  • 10. Precise protein quantification based on peptide quantification using iTRAQ.
    Boehm AM, Pütz S, Altenhöfer D, Sickmann A, Falk M.
    BMC Bioinformatics; 2007 Jun 21; 8():214. PubMed ID: 17584939
    [Abstract] [Full Text] [Related]

  • 11. Quantitative, high-resolution proteomics for data-driven systems biology.
    Cox J, Mann M.
    Annu Rev Biochem; 2011 Jun 21; 80():273-99. PubMed ID: 21548781
    [Abstract] [Full Text] [Related]

  • 12. MASPECTRAS: a platform for management and analysis of proteomics LC-MS/MS data.
    Hartler J, Thallinger GG, Stocker G, Sturn A, Burkard TR, Körner E, Rader R, Schmidt A, Mechtler K, Trajanoski Z.
    BMC Bioinformatics; 2007 Jun 13; 8():197. PubMed ID: 17567892
    [Abstract] [Full Text] [Related]

  • 13. MS-BID: a Java package for label-free LC-MS-based comparative proteomic analysis.
    Hwang D, Zhang N, Lee H, Yi E, Zhang H, Lee IY, Hood L, Aebersold R.
    Bioinformatics; 2008 Nov 15; 24(22):2641-2. PubMed ID: 18805798
    [Abstract] [Full Text] [Related]

  • 14. Normalization of peak intensities in bottom-up MS-based proteomics using singular value decomposition.
    Karpievitch YV, Taverner T, Adkins JN, Callister SJ, Anderson GA, Smith RD, Dabney AR.
    Bioinformatics; 2009 Oct 01; 25(19):2573-80. PubMed ID: 19602524
    [Abstract] [Full Text] [Related]

  • 15. Experimental design and data-analysis in label-free quantitative LC/MS proteomics: A tutorial with MSqRob.
    Goeminne LJE, Gevaert K, Clement L.
    J Proteomics; 2018 Jan 16; 171():23-36. PubMed ID: 28391044
    [Abstract] [Full Text] [Related]

  • 16. MASSyPup--an 'out of the box' solution for the analysis of mass spectrometry data.
    Winkler R.
    J Mass Spectrom; 2014 Jan 16; 49(1):37-42. PubMed ID: 24446261
    [Abstract] [Full Text] [Related]

  • 17. Protein identification using 2D-LC-MS/MS.
    Delahunty C, Yates JR.
    Methods; 2005 Mar 16; 35(3):248-55. PubMed ID: 15722221
    [Abstract] [Full Text] [Related]

  • 18. IQuant: an automated pipeline for quantitative proteomics based upon isobaric tags.
    Wen B, Zhou R, Feng Q, Wang Q, Wang J, Liu S.
    Proteomics; 2014 Oct 16; 14(20):2280-5. PubMed ID: 25069810
    [Abstract] [Full Text] [Related]

  • 19. Qupe--a Rich Internet Application to take a step forward in the analysis of mass spectrometry-based quantitative proteomics experiments.
    Albaum SP, Neuweger H, Fränzel B, Lange S, Mertens D, Trötschel C, Wolters D, Kalinowski J, Nattkemper TW, Goesmann A.
    Bioinformatics; 2009 Dec 01; 25(23):3128-34. PubMed ID: 19808875
    [Abstract] [Full Text] [Related]

  • 20. Bioinformatics for LC-MS/MS-based proteomics.
    Jacob RJ.
    Methods Mol Biol; 2010 Dec 01; 658():61-91. PubMed ID: 20839098
    [Abstract] [Full Text] [Related]

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