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Pubmed for Handhelds

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Journal Abstract Search

188 related items for PubMed ID: 19208162

  • 21. LocalAli: an evolutionary-based local alignment approach to identify functionally conserved modules in multiple networks.
    Hu J, Reinert K.
    Bioinformatics; 2015 Feb 01; 31(3):363-72. PubMed ID: 25282642
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  • 23. Integrative network alignment reveals large regions of global network similarity in yeast and human.
    Kuchaiev O, Przulj N.
    Bioinformatics; 2011 May 15; 27(10):1390-6. PubMed ID: 21414992
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  • 27. Functionally guided alignment of protein interaction networks for module detection.
    Ali W, Deane CM.
    Bioinformatics; 2009 Dec 01; 25(23):3166-73. PubMed ID: 19797409
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  • 29. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
    Maskey S, Cho YR.
    BMC Genomics; 2019 Dec 24; 20(Suppl 9):964. PubMed ID: 31874635
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  • 30. Fr-TM-align: a new protein structural alignment method based on fragment alignments and the TM-score.
    Pandit SB, Skolnick J.
    BMC Bioinformatics; 2008 Dec 12; 9():531. PubMed ID: 19077267
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  • 31. Fast and accurate non-sequential protein structure alignment using a new asymmetric linear sum assignment heuristic.
    Brown P, Pullan W, Yang Y, Zhou Y.
    Bioinformatics; 2016 Feb 01; 32(3):370-7. PubMed ID: 26454279
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  • 32. Dynamic programming.
    Nalbantoğlu ÖU.
    Methods Mol Biol; 2014 Feb 01; 1079():3-27. PubMed ID: 24170392
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  • 33. DAMA: a method for computing multiple alignments of protein structures using local structure descriptors.
    Daniluk P, Oleniecki T, Lesyng B.
    Bioinformatics; 2021 Dec 22; 38(1):80-85. PubMed ID: 34396393
    [Abstract] [Full Text] [Related]

  • 34. Node fingerprinting: an efficient heuristic for aligning biological networks.
    Radu A, Charleston M.
    J Comput Biol; 2014 Oct 22; 21(10):760-70. PubMed ID: 25148127
    [Abstract] [Full Text] [Related]

  • 35. An iterative method for faster sum-of-pairs multiple sequence alignment.
    Reinert K, Stoye J, Will T.
    Bioinformatics; 2000 Sep 22; 16(9):808-14. PubMed ID: 11108703
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  • 36. Pairwise sequence alignment for very long sequences on GPUs.
    Li J, Ranka S, Sahni S.
    Int J Bioinform Res Appl; 2014 Sep 22; 10(4-5):345-68. PubMed ID: 24989857
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  • 37. A multiobjective memetic algorithm for PPI network alignment.
    Clark C, Kalita J.
    Bioinformatics; 2015 Jun 15; 31(12):1988-98. PubMed ID: 25667548
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  • 38. FAST: a novel protein structure alignment algorithm.
    Zhu J, Weng Z.
    Proteins; 2005 Feb 15; 58(3):618-27. PubMed ID: 15609341
    [Abstract] [Full Text] [Related]

  • 39. Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization.
    Hashemifar S, Huang Q, Xu J.
    J Comput Biol; 2016 Nov 15; 23(11):903-911. PubMed ID: 27428933
    [Abstract] [Full Text] [Related]

  • 40. Index-Based Network Aligner of Protein-Protein Interaction Networks.
    Elmsallati A, Msalati A, Kalita J.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Nov 15; 15(1):330-336. PubMed ID: 28113986
    [Abstract] [Full Text] [Related]

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