These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

126 related items for PubMed ID: 19209698

  • 1. Pairwise alignment of interaction networks by fast identification of maximal conserved patterns.
    Tian W, Samatova NF.
    Pac Symp Biocomput; 2009; ():99-110. PubMed ID: 19209698
    [Abstract] [Full Text] [Related]

  • 2. Global alignment of pairwise protein interaction networks for maximal common conserved patterns.
    Tian W, Samatova NF.
    Int J Genomics; 2013; 2013():670623. PubMed ID: 23710435
    [Abstract] [Full Text] [Related]

  • 3. C-GRAAL: common-neighbors-based global GRAph ALignment of biological networks.
    Memišević V, Pržulj N.
    Integr Biol (Camb); 2012 Jul; 4(7):734-43. PubMed ID: 22234340
    [Abstract] [Full Text] [Related]

  • 4. Global alignment of protein-protein interaction networks.
    Mongiovì M, Sharan R.
    Methods Mol Biol; 2013 Jul; 939():21-34. PubMed ID: 23192538
    [Abstract] [Full Text] [Related]

  • 5. An efficient algorithm for pairwise local alignment of protein interaction networks.
    Chen W, Schmidt M, Tian W, Samatova NF, Zhang S.
    J Bioinform Comput Biol; 2015 Apr; 13(2):1550003. PubMed ID: 25477149
    [Abstract] [Full Text] [Related]

  • 6. Learning the structure of protein-protein interaction networks.
    Kuchaiev O, Przulj N.
    Pac Symp Biocomput; 2009 Apr; ():39-50. PubMed ID: 19209694
    [Abstract] [Full Text] [Related]

  • 7. Graemlin: general and robust alignment of multiple large interaction networks.
    Flannick J, Novak A, Srinivasan BS, McAdams HH, Batzoglou S.
    Genome Res; 2006 Sep; 16(9):1169-81. PubMed ID: 16899655
    [Abstract] [Full Text] [Related]

  • 8. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
    Maskey S, Cho YR.
    BMC Genomics; 2019 Dec 24; 20(Suppl 9):964. PubMed ID: 31874635
    [Abstract] [Full Text] [Related]

  • 9. Global alignment of multiple protein interaction networks.
    Singh R, Xu J, Berger B.
    Pac Symp Biocomput; 2008 Dec 24; ():303-14. PubMed ID: 18229695
    [Abstract] [Full Text] [Related]

  • 10. Pairwise alignment of protein interaction networks.
    Koyutürk M, Kim Y, Topkara U, Subramaniam S, Szpankowski W, Grama A.
    J Comput Biol; 2006 Mar 24; 13(2):182-99. PubMed ID: 16597234
    [Abstract] [Full Text] [Related]

  • 11. Pin-Align: a new dynamic programming approach to align protein-protein interaction networks.
    Amir-Ghiasvand F, Nowzari-Dalini A, Momenzadeh V.
    Comput Math Methods Med; 2014 Mar 24; 2014():393908. PubMed ID: 25435900
    [Abstract] [Full Text] [Related]

  • 12. Annotating proteins by mining protein interaction networks.
    Kirac M, Ozsoyoglu G, Yang J.
    Bioinformatics; 2006 Jul 15; 22(14):e260-70. PubMed ID: 16873481
    [Abstract] [Full Text] [Related]

  • 13. Identification of conserved protein complexes based on a model of protein network evolution.
    Hirsh E, Sharan R.
    Bioinformatics; 2007 Jan 15; 23(2):e170-6. PubMed ID: 17237088
    [Abstract] [Full Text] [Related]

  • 14. Predicting protein-protein interaction specificity through the integration of three-dimensional structural information and the evolutionary record of protein domains.
    Panjkovich A, Aloy P.
    Mol Biosyst; 2010 Apr 15; 6(4):741-9. PubMed ID: 20237652
    [Abstract] [Full Text] [Related]

  • 15. Utilizing shared interacting domain patterns and Gene Ontology information to improve protein-protein interaction prediction.
    Roslan R, Othman RM, Shah ZA, Kasim S, Asmuni H, Taliba J, Hassan R, Zakaria Z.
    Comput Biol Med; 2010 Jun 15; 40(6):555-64. PubMed ID: 20417930
    [Abstract] [Full Text] [Related]

  • 16. SPIDer: Saccharomyces protein-protein interaction database.
    Wu X, Zhu L, Guo J, Fu C, Zhou H, Dong D, Li Z, Zhang DY, Lin K.
    BMC Bioinformatics; 2006 Dec 18; 7 Suppl 5(Suppl 5):S16. PubMed ID: 17254300
    [Abstract] [Full Text] [Related]

  • 17. Predicting protein function by frequent functional association pattern mining in protein interaction networks.
    Cho YR, Zhang A.
    IEEE Trans Inf Technol Biomed; 2010 Jan 18; 14(1):30-6. PubMed ID: 19726271
    [Abstract] [Full Text] [Related]

  • 18. Masking residues using context-specific evolutionary conservation significantly improves short linear motif discovery.
    Davey NE, Shields DC, Edwards RJ.
    Bioinformatics; 2009 Feb 15; 25(4):443-50. PubMed ID: 19136552
    [Abstract] [Full Text] [Related]

  • 19. LocalAli: an evolutionary-based local alignment approach to identify functionally conserved modules in multiple networks.
    Hu J, Reinert K.
    Bioinformatics; 2015 Feb 01; 31(3):363-72. PubMed ID: 25282642
    [Abstract] [Full Text] [Related]

  • 20. Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise linear gap cost.
    Yamada S, Gotoh O, Yamana H.
    BMC Bioinformatics; 2006 Dec 01; 7():524. PubMed ID: 17137519
    [Abstract] [Full Text] [Related]

    Page: [Next] [New Search]
    of 7.