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Journal Abstract Search

101 related items for PubMed ID: 19209702

  • 1. Identifying dynamic network modules with temporal and spatial constraints.
    Jin R, McCallen S, Liu CC, Xiang Y, Almaas E, Zhou XJ.
    Pac Symp Biocomput; 2009; ():203-14. PubMed ID: 19209702
    [Abstract] [Full Text] [Related]

  • 2. Learning the structure of protein-protein interaction networks.
    Kuchaiev O, Przulj N.
    Pac Symp Biocomput; 2009; ():39-50. PubMed ID: 19209694
    [Abstract] [Full Text] [Related]

  • 3. Identifying protein complexes and functional modules--from static PPI networks to dynamic PPI networks.
    Chen B, Fan W, Liu J, Wu FX.
    Brief Bioinform; 2014 Mar; 15(2):177-94. PubMed ID: 23780996
    [Abstract] [Full Text] [Related]

  • 4. Identification of functional modules in a PPI network by clique percolation clustering.
    Zhang S, Ning X, Zhang XS.
    Comput Biol Chem; 2006 Dec; 30(6):445-51. PubMed ID: 17098476
    [Abstract] [Full Text] [Related]

  • 5. ModuleSearch: finding functional modules in a protein-protein interaction network.
    Cui G, Shrestha R, Han K.
    Comput Methods Biomech Biomed Engin; 2012 Dec; 15(7):691-9. PubMed ID: 21827286
    [Abstract] [Full Text] [Related]

  • 6. Detecting functional modules in the yeast protein-protein interaction network.
    Chen J, Yuan B.
    Bioinformatics; 2006 Sep 15; 22(18):2283-90. PubMed ID: 16837529
    [Abstract] [Full Text] [Related]

  • 7. Reverse engineering the evolution of protein interaction networks.
    Gibson TA, Goldberg DS.
    Pac Symp Biocomput; 2009 Sep 15; ():190-202. PubMed ID: 19213136
    [Abstract] [Full Text] [Related]

  • 8. Combining functional and topological properties to identify core modules in protein interaction networks.
    Lubovac Z, Gamalielsson J, Olsson B.
    Proteins; 2006 Sep 01; 64(4):948-59. PubMed ID: 16794996
    [Abstract] [Full Text] [Related]

  • 9. Fitting a geometric graph to a protein-protein interaction network.
    Higham DJ, Rasajski M, Przulj N.
    Bioinformatics; 2008 Apr 15; 24(8):1093-9. PubMed ID: 18344248
    [Abstract] [Full Text] [Related]

  • 10. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
    Yu L, Gao L, Li K, Zhao Y, Chiu DK.
    Comput Biol Chem; 2011 Oct 12; 35(5):298-307. PubMed ID: 22000801
    [Abstract] [Full Text] [Related]

  • 11. Module networks: identifying regulatory modules and their condition-specific regulators from gene expression data.
    Segal E, Shapira M, Regev A, Pe'er D, Botstein D, Koller D, Friedman N.
    Nat Genet; 2003 Jun 12; 34(2):166-76. PubMed ID: 12740579
    [Abstract] [Full Text] [Related]

  • 12. Modular organization of protein interaction networks.
    Luo F, Yang Y, Chen CF, Chang R, Zhou J, Scheuermann RH.
    Bioinformatics; 2007 Jan 15; 23(2):207-14. PubMed ID: 17092991
    [Abstract] [Full Text] [Related]

  • 13. Structure discovery in PPI networks using pattern-based network decomposition.
    Bachman P, Liu Y.
    Bioinformatics; 2009 Jul 15; 25(14):1814-21. PubMed ID: 19447784
    [Abstract] [Full Text] [Related]

  • 14. Fast and accurate method for identifying high-quality protein-interaction modules by clique merging and its application to yeast.
    Zhang C, Liu S, Zhou Y.
    J Proteome Res; 2006 Apr 15; 5(4):801-7. PubMed ID: 16602686
    [Abstract] [Full Text] [Related]

  • 15. Integrated analysis of multiple data sources reveals modular structure of biological networks.
    Lu H, Shi B, Wu G, Zhang Y, Zhu X, Zhang Z, Liu C, Zhao Y, Wu T, Wang J, Chen R.
    Biochem Biophys Res Commun; 2006 Jun 23; 345(1):302-9. PubMed ID: 16690033
    [Abstract] [Full Text] [Related]

  • 16. Four-dimensional visualisation and analysis of protein-protein interaction networks.
    Goel A, Li SS, Wilkins MR.
    Proteomics; 2011 Jul 23; 11(13):2672-82. PubMed ID: 21630449
    [Abstract] [Full Text] [Related]

  • 17. An integrative approach to modeling biological networks.
    Memisevic V, Milenkovic T, Przulj N.
    J Integr Bioinform; 2010 Mar 25; 7(3):. PubMed ID: 20375453
    [Abstract] [Full Text] [Related]

  • 18. Homogeneous decomposition of protein interaction networks: refining the description of intra-modular interactions.
    Del Mondo G, Eveillard D, Rusu I.
    Bioinformatics; 2009 Apr 01; 25(7):926-32. PubMed ID: 19223451
    [Abstract] [Full Text] [Related]

  • 19. Unraveling dynamic activities of autocrine pathways that control drug-response transcriptome networks.
    Tamada Y, Araki H, Imoto S, Nagasaki M, Doi A, Nakanishi Y, Tomiyasu Y, Yasuda K, Dunmore B, Sanders D, Humphreys S, Print C, Charnock-Jones DS, Tashiro K, Kuhara S, Miyano S.
    Pac Symp Biocomput; 2009 Apr 01; ():251-63. PubMed ID: 19209706
    [Abstract] [Full Text] [Related]

  • 20. Pairwise alignment of interaction networks by fast identification of maximal conserved patterns.
    Tian W, Samatova NF.
    Pac Symp Biocomput; 2009 Apr 01; ():99-110. PubMed ID: 19209698
    [Abstract] [Full Text] [Related]

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