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Journal Abstract Search

305 related items for PubMed ID: 19369500

  • 1. PseudoViewer3: generating planar drawings of large-scale RNA structures with pseudoknots.
    Byun Y, Han K.
    Bioinformatics; 2009 Jun 01; 25(11):1435-7. PubMed ID: 19369500
    [Abstract] [Full Text] [Related]

  • 2. PseudoViewer: web application and web service for visualizing RNA pseudoknots and secondary structures.
    Byun Y, Han K.
    Nucleic Acids Res; 2006 Jul 01; 34(Web Server issue):W416-22. PubMed ID: 16845039
    [Abstract] [Full Text] [Related]

  • 3. PSEUDOVIEWER2: Visualization of RNA pseudoknots of any type.
    Han K, Byun Y.
    Nucleic Acids Res; 2003 Jul 01; 31(13):3432-40. PubMed ID: 12824341
    [Abstract] [Full Text] [Related]

  • 4. PseudoViewer: automatic visualization of RNA pseudoknots.
    Han K, Lee Y, Kim W.
    Bioinformatics; 2002 Jul 01; 18 Suppl 1():S321-8. PubMed ID: 12169562
    [Abstract] [Full Text] [Related]

  • 5. An efficient algorithm for planar drawing of RNA structures with pseudoknots of any type.
    Byun Y, Han K.
    J Bioinform Comput Biol; 2016 Jun 01; 14(3):1650009. PubMed ID: 26932273
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  • 10. jViz.RNA 4.0-Visualizing pseudoknots and RNA editing employing compressed tree graphs.
    Shabash B, Wiese KC.
    PLoS One; 2019 Jun 01; 14(5):e0210281. PubMed ID: 31059508
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  • 11. Prediction of RNA secondary structure by free energy minimization.
    Mathews DH, Turner DH.
    Curr Opin Struct Biol; 2006 Jun 01; 16(3):270-8. PubMed ID: 16713706
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  • 12. A partition function algorithm for nucleic acid secondary structure including pseudoknots.
    Dirks RM, Pierce NA.
    J Comput Chem; 2003 Oct 01; 24(13):1664-77. PubMed ID: 12926009
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  • 13. RNA Movies 2: sequential animation of RNA secondary structures.
    Kaiser A, Krüger J, Evers DJ.
    Nucleic Acids Res; 2007 Jul 01; 35(Web Server issue):W330-4. PubMed ID: 17567618
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  • 14. Drawing and editing the secondary structure(s) of RNA.
    Ponty Y, Leclerc F.
    Methods Mol Biol; 2015 Jul 01; 1269():63-100. PubMed ID: 25577373
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  • 15. Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics.
    Reeder J, Giegerich R.
    BMC Bioinformatics; 2004 Aug 04; 5():104. PubMed ID: 15294028
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  • 16. Identifying complete RNA structural ensembles including pseudoknots.
    Gupta A, Rahman R, Li K, Gribskov M.
    RNA Biol; 2012 Feb 04; 9(2):187-99. PubMed ID: 22418849
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  • 17. PseudoBase++: an extension of PseudoBase for easy searching, formatting and visualization of pseudoknots.
    Taufer M, Licon A, Araiza R, Mireles D, van Batenburg FH, Gultyaev AP, Leung MY.
    Nucleic Acids Res; 2009 Jan 04; 37(Database issue):D127-35. PubMed ID: 18988624
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  • 19. Combinatorics of RNA structures with pseudoknots.
    Jin EY, Qin J, Reidys CM.
    Bull Math Biol; 2008 Jan 04; 70(1):45-67. PubMed ID: 17896159
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  • 20. New developments in structure determination of pseudoknots.
    Hilbers CW, Michiels PJ, Heus HA.
    Biopolymers; 1998 Jan 04; 48(2-3):137-53. PubMed ID: 10333742
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