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506 related items for PubMed ID: 19388648

  • 1. Mapping proton wires in proteins: carbonic anhydrase and GFP chromophore biosynthesis.
    Shinobu A, Agmon N.
    J Phys Chem A; 2009 Jul 02; 113(26):7253-66. PubMed ID: 19388648
    [Abstract] [Full Text] [Related]

  • 2. Speeding up proton transfer in a fast enzyme: kinetic and crystallographic studies on the effect of hydrophobic amino acid substitutions in the active site of human carbonic anhydrase II.
    Fisher SZ, Tu C, Bhatt D, Govindasamy L, Agbandje-McKenna M, McKenna R, Silverman DN.
    Biochemistry; 2007 Mar 27; 46(12):3803-13. PubMed ID: 17330962
    [Abstract] [Full Text] [Related]

  • 3. Visualizing proton antenna in a high-resolution green fluorescent protein structure.
    Shinobu A, Palm GJ, Schierbeek AJ, Agmon N.
    J Am Chem Soc; 2010 Aug 18; 132(32):11093-102. PubMed ID: 20698675
    [Abstract] [Full Text] [Related]

  • 4. Identification of proton-transfer pathways in human carbonic anhydrase II.
    Roy A, Taraphder S.
    J Phys Chem B; 2007 Sep 06; 111(35):10563-76. PubMed ID: 17691838
    [Abstract] [Full Text] [Related]

  • 5. Structural and kinetic characterization of active-site histidine as a proton shuttle in catalysis by human carbonic anhydrase II.
    Fisher Z, Hernandez Prada JA, Tu C, Duda D, Yoshioka C, An H, Govindasamy L, Silverman DN, McKenna R.
    Biochemistry; 2005 Feb 01; 44(4):1097-105. PubMed ID: 15667203
    [Abstract] [Full Text] [Related]

  • 6. Proton transfer in carbonic anhydrase is controlled by electrostatics rather than the orientation of the acceptor.
    Riccardi D, König P, Guo H, Cui Q.
    Biochemistry; 2008 Feb 26; 47(8):2369-78. PubMed ID: 18247480
    [Abstract] [Full Text] [Related]

  • 7. Kinetic isotope effects for concerted multiple proton transfer: a direct dynamics study of an active-site model of carbonic anhydrase II.
    Smedarchina Z, Siebrand W, Fernández-Ramos A, Cui Q.
    J Am Chem Soc; 2003 Jan 08; 125(1):243-51. PubMed ID: 12515527
    [Abstract] [Full Text] [Related]

  • 8. Solvent-mediated proton transfer in catalysis by carbonic anhydrase.
    Silverman DN, McKenna R.
    Acc Chem Res; 2007 Aug 08; 40(8):669-75. PubMed ID: 17550224
    [Abstract] [Full Text] [Related]

  • 9. Proton transfer pathways in the mutant His-64-Ala of human carbonic anhydrase II.
    Roy A, Taraphder S.
    Biopolymers; 2006 Aug 15; 82(6):623-30. PubMed ID: 16557501
    [Abstract] [Full Text] [Related]

  • 10. A theoretical study on the detection of proton transfer pathways in some mutants of human carbonic anhydrase II.
    Roy A, Taraphder S.
    J Phys Chem B; 2008 Oct 30; 112(43):13597-607. PubMed ID: 18826189
    [Abstract] [Full Text] [Related]

  • 11. Proton transfer in a Thr200His mutant of human carbonic anhydrase II.
    Bhatt D, Tu C, Fisher SZ, Hernandez Prada JA, McKenna R, Silverman DN.
    Proteins; 2005 Nov 01; 61(2):239-45. PubMed ID: 16106378
    [Abstract] [Full Text] [Related]

  • 12. Structure of bovine carbonic anhydrase II at 1.95 A resolution.
    Saito R, Sato T, Ikai A, Tanaka N.
    Acta Crystallogr D Biol Crystallogr; 2004 Apr 01; 60(Pt 4):792-5. PubMed ID: 15039588
    [Abstract] [Full Text] [Related]

  • 13. Structure-based design of an intramolecular proton transfer site in murine carbonic anhydrase V.
    Heck RW, Boriack-Sjodin PA, Qian M, Tu C, Christianson DW, Laipis PJ, Silverman DN.
    Biochemistry; 1996 Sep 10; 35(36):11605-11. PubMed ID: 8794740
    [Abstract] [Full Text] [Related]

  • 14. Kinetics of switchable proton escape from a proton-wire within green fluorescence protein.
    Agmon N.
    J Phys Chem B; 2007 Jul 12; 111(27):7870-8. PubMed ID: 17569555
    [Abstract] [Full Text] [Related]

  • 15. Excited states of GFP chromophore and active site studied by the SAC-CI method: effect of protein-environment and mutations.
    Hasegawa JY, Fujimoto K, Swerts B, Miyahara T, Nakatsuji H.
    J Comput Chem; 2007 Nov 30; 28(15):2443-52. PubMed ID: 17721879
    [Abstract] [Full Text] [Related]

  • 16. Structural and kinetic analysis of proton shuttle residues in the active site of human carbonic anhydrase III.
    Elder I, Fisher Z, Laipis PJ, Tu C, McKenna R, Silverman DN.
    Proteins; 2007 Jul 01; 68(1):337-43. PubMed ID: 17427958
    [Abstract] [Full Text] [Related]

  • 17. Disruption of the active site solvent network in carbonic anhydrase II decreases the efficiency of proton transfer.
    Jackman JE, Merz KM, Fierke CA.
    Biochemistry; 1996 Dec 24; 35(51):16421-8. PubMed ID: 8987973
    [Abstract] [Full Text] [Related]

  • 18. Mechanistic aspects of proton chain transfer: a computational study for the green fluorescent protein chromophore.
    Wang S, Smith SC.
    J Phys Chem B; 2006 Mar 16; 110(10):5084-93. PubMed ID: 16526751
    [Abstract] [Full Text] [Related]

  • 19. Defining the role of arginine 96 in green fluorescent protein fluorophore biosynthesis.
    Wood TI, Barondeau DP, Hitomi C, Kassmann CJ, Tainer JA, Getzoff ED.
    Biochemistry; 2005 Dec 13; 44(49):16211-20. PubMed ID: 16331981
    [Abstract] [Full Text] [Related]

  • 20. Atomic crystal and molecular dynamics simulation structures of human carbonic anhydrase II: insights into the proton transfer mechanism.
    Fisher SZ, Maupin CM, Budayova-Spano M, Govindasamy L, Tu C, Agbandje-McKenna M, Silverman DN, Voth GA, McKenna R.
    Biochemistry; 2007 Mar 20; 46(11):2930-7. PubMed ID: 17319692
    [Abstract] [Full Text] [Related]

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