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Journal Abstract Search

167 related items for PubMed ID: 19393172

  • 1. The rapid evolution of signal peptides is mainly caused by relaxed selection on non-synonymous and synonymous sites.
    Li YD, Xie ZY, Du YL, Zhou Z, Mao XM, Lv LX, Li YQ.
    Gene; 2009 May 01; 436(1-2):8-11. PubMed ID: 19393172
    [Abstract] [Full Text] [Related]

  • 2. Whole genome analysis of non-optimal codon usage in secretory signal sequences of Streptomyces coelicolor.
    Li YD, Li YQ, Chen JS, Dong HJ, Guan WJ, Zhou H.
    Biosystems; 2006 Sep 01; 85(3):225-30. PubMed ID: 16644095
    [Abstract] [Full Text] [Related]

  • 3. Selective pressures at a codon-level predict deleterious mutations in human disease genes.
    Arbiza L, Duchi S, Montaner D, Burguet J, Pantoja-Uceda D, Pineda-Lucena A, Dopazo J, Dopazo H.
    J Mol Biol; 2006 May 19; 358(5):1390-404. PubMed ID: 16584746
    [Abstract] [Full Text] [Related]

  • 4. A dissection of volatility in yeast.
    Stoletzki N, Welch J, Hermisson J, Eyre-Walker A.
    Mol Biol Evol; 2005 Oct 19; 22(10):2022-6. PubMed ID: 15958784
    [Abstract] [Full Text] [Related]

  • 5. Towards realistic codon models: among site variability and dependency of synonymous and non-synonymous rates.
    Mayrose I, Doron-Faigenboim A, Bacharach E, Pupko T.
    Bioinformatics; 2007 Jul 01; 23(13):i319-27. PubMed ID: 17646313
    [Abstract] [Full Text] [Related]

  • 6. Adaptive evolution after duplication of penaeidin antimicrobial peptides.
    Padhi A, Verghese B, Otta SK, Varghese B, Ramu K.
    Fish Shellfish Immunol; 2007 Sep 01; 23(3):553-66. PubMed ID: 17449277
    [Abstract] [Full Text] [Related]

  • 7. Variation in synonymous codon use and DNA polymorphism within the Drosophila genome.
    Bierne N, Eyre-Walker A.
    J Evol Biol; 2006 Jan 01; 19(1):1-11. PubMed ID: 16405571
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  • 9. Adjusting for selection on synonymous sites in estimates of evolutionary distance.
    Hirsh AE, Fraser HB, Wall DP.
    Mol Biol Evol; 2005 Jan 01; 22(1):174-7. PubMed ID: 15371530
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  • 11. Synonymous codon usage in Escherichia coli: selection for translational accuracy.
    Stoletzki N, Eyre-Walker A.
    Mol Biol Evol; 2007 Feb 01; 24(2):374-81. PubMed ID: 17101719
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  • 12. Large-scale analyses of synonymous substitution rates can be sensitive to assumptions about the process of mutation.
    Aris-Brosou S, Bielawski JP.
    Gene; 2006 Aug 15; 378():58-64. PubMed ID: 16797879
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  • 13. Why are translationally sub-optimal synonymous codons used in Escherichia coli?
    Smith NG, Eyre-Walker A.
    J Mol Evol; 2001 Sep 15; 53(3):225-36. PubMed ID: 11523009
    [Abstract] [Full Text] [Related]

  • 14. Differential codon usage for conserved amino acids: evidence that the serine codons TCN were primordial.
    Diaz-Lazcoz Y, Hénaut A, Vigier P, Risler JL.
    J Mol Biol; 1995 Jul 07; 250(2):123-7. PubMed ID: 7608964
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  • 15. Likelihood-based clustering (LiBaC) for codon models, a method for grouping sites according to similarities in the underlying process of evolution.
    Bao L, Gu H, Dunn KA, Bielawski JP.
    Mol Biol Evol; 2008 Sep 07; 25(9):1995-2007. PubMed ID: 18586695
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  • 18. Synonymous substitutions substantially improve evolutionary inference from highly diverged proteins.
    Seo TK, Kishino H.
    Syst Biol; 2008 Jun 07; 57(3):367-77. PubMed ID: 18570032
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  • 19. Positive selection at sites of multiple amino acid replacements since rat-mouse divergence.
    Bazykin GA, Kondrashov FA, Ogurtsov AY, Sunyaev S, Kondrashov AS.
    Nature; 2004 Jun 03; 429(6991):558-62. PubMed ID: 15175752
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