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Journal Abstract Search

113 related items for PubMed ID: 1946321

  • 1. Alpha-helix folding by Monte Carlo simulated annealing in isolated C-peptide of ribonuclease A.
    Okamoto Y, Fukugita M, Nakazawa T, Kawai H.
    Protein Eng; 1991 Aug; 4(6):639-47. PubMed ID: 1946321
    [Abstract] [Full Text] [Related]

  • 2. A pH-dependent variation in alpha-helix structure of the S-peptide of ribonuclease A studied by Monte Carlo simulated annealing.
    Nakazawa T, Ban S, Okuda Y, Masuya M, Mitsutake A, Okamoto Y.
    Biopolymers; 2002 Apr 05; 63(4):273-9. PubMed ID: 11807754
    [Abstract] [Full Text] [Related]

  • 3. Beta-sheet folding of fragment (16-36) of bovine pancreatic trypsin inhibitor as predicted by Monte Carlo simulated annealing.
    Nakazawa T, Kawai H, Okamoto Y, Fukugita M.
    Protein Eng; 1992 Sep 05; 5(6):495-503. PubMed ID: 1279665
    [Abstract] [Full Text] [Related]

  • 4. Alpha-helix structure of parathyroid hormone fragment (1-34) predicted by Monte Carlo simulated annealing.
    Okamoto Y, Kikuchi T, Nakazawa T, Kawai H.
    Int J Pept Protein Res; 1993 Sep 05; 42(3):300-3. PubMed ID: 8225786
    [Abstract] [Full Text] [Related]

  • 5. Dependence on the dielectric model and pH in a synthetic helical peptide studied by Monte Carlo simulated annealing.
    Okamoto Y.
    Biopolymers; 1994 Apr 05; 34(4):529-39. PubMed ID: 8186363
    [Abstract] [Full Text] [Related]

  • 6. Interactions that favor the native over the non-native disulfide bond among residues 58-72 in the oxidative folding of bovine pancreatic ribonuclease A.
    Carty RP, Pincus MR, Scheraga HA.
    Biochemistry; 2002 Dec 17; 41(50):14815-9. PubMed ID: 12475229
    [Abstract] [Full Text] [Related]

  • 7. Conformation of the C-terminus of endothelin-1 in aqueous solution studied by Monte-Carlo simulation.
    Kuroda M, Yamazaki K, Taga T.
    FEBS Lett; 1994 Dec 05; 355(3):263-6. PubMed ID: 7988685
    [Abstract] [Full Text] [Related]

  • 8. Helix-forming tendencies of nonpolar amino acids predicted by Monte Carlo simulated annealing.
    Okamoto Y.
    Proteins; 1994 May 05; 19(1):14-23. PubMed ID: 8066082
    [Abstract] [Full Text] [Related]

  • 9. Determination of the conformation of folding initiation sites in proteins by computer simulation.
    Avbelj F, Moult J.
    Proteins; 1995 Oct 05; 23(2):129-41. PubMed ID: 8592695
    [Abstract] [Full Text] [Related]

  • 10. Prediction of polyelectrolyte polypeptide structures using Monte Carlo conformational search methods with implicit solvation modeling.
    Evans JS, Chan SI, Goddard WA.
    Protein Sci; 1995 Oct 05; 4(10):2019-31. PubMed ID: 8535238
    [Abstract] [Full Text] [Related]

  • 11. Monte Carlo studies of folding, dynamics, and stability in alpha-helices.
    Shental-Bechor D, Kirca S, Ben-Tal N, Haliloglu T.
    Biophys J; 2005 Apr 05; 88(4):2391-402. PubMed ID: 15653741
    [Abstract] [Full Text] [Related]

  • 12. Electrostatic effects on the alpha-helix and beta-strand formation of BPTI(16-36) studied by Monte Carlo simulated annealing.
    Nakazawa T, Okamoto Y.
    J Pept Res; 1999 Sep 05; 54(3):230-6. PubMed ID: 10517160
    [Abstract] [Full Text] [Related]

  • 13. Simulated annealing approach to the study of protein structures.
    Chou KC, Carlacci L.
    Protein Eng; 1991 Aug 05; 4(6):661-7. PubMed ID: 1946323
    [Abstract] [Full Text] [Related]

  • 14. Structural characterization of a three-disulfide intermediate of ribonuclease A involved in both the folding and unfolding pathways.
    Talluri S, Rothwarf DM, Scheraga HA.
    Biochemistry; 1994 Aug 30; 33(34):10437-49. PubMed ID: 8068682
    [Abstract] [Full Text] [Related]

  • 15. The loop problem in proteins: a Monte Carlo simulated annealing approach.
    Carlacci L, Englander SW.
    Biopolymers; 1993 Aug 30; 33(8):1271-86. PubMed ID: 7689864
    [Abstract] [Full Text] [Related]

  • 16. Energy-based reconstruction of a protein backbone from its alpha-carbon trace by a Monte-Carlo method.
    Kaźmierkiewicz R, Liwo A, Scheraga HA.
    J Comput Chem; 2002 May 30; 23(7):715-23. PubMed ID: 11948589
    [Abstract] [Full Text] [Related]

  • 17. One Peptide Reveals the Two Faces of α-Helix Unfolding-Folding Dynamics.
    Jesus CSH, Cruz PF, Arnaut LG, Brito RMM, Serpa C.
    J Phys Chem B; 2018 Apr 12; 122(14):3790-3800. PubMed ID: 29558133
    [Abstract] [Full Text] [Related]

  • 18. Development of SAAP3D force field and the application to replica-exchange Monte Carlo simulation for chignolin and C-peptide.
    Iwaoka M, Suzuki T, Shoji Y, Dedachi K, Shimosato T, Minezaki T, Hojo H, Onuki H, Hirota H.
    J Comput Aided Mol Des; 2017 Dec 12; 31(12):1039-1052. PubMed ID: 29147837
    [Abstract] [Full Text] [Related]

  • 19. Dynamic Monte Carlo simulations of a new lattice model of globular protein folding, structure and dynamics.
    Skolnick J, Kolinski A.
    J Mol Biol; 1991 Sep 20; 221(2):499-531. PubMed ID: 1920430
    [Abstract] [Full Text] [Related]

  • 20. Analysis of the structure of ribonuclease A in native and partially denatured states by time-resolved noradiative dynamic excitation energy transfer between site-specific extrinsic probes.
    Buckler DR, Haas E, Scheraga HA.
    Biochemistry; 1995 Dec 12; 34(49):15965-78. PubMed ID: 8519753
    [Abstract] [Full Text] [Related]

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