These tools will no longer be maintained as of December 31, 2024. Archived website can be found here. PubMed4Hh GitHub repository can be found here. Contact NLM Customer Service if you have questions.


Pubmed for Handhelds

PUBMED FOR HANDHELDS

Journal Abstract Search

279 related items for PubMed ID: 19476351

  • 1. Contribution of the closing base pair to exceptional stability in RNA tetraloops: roles for molecular mimicry and electrostatic factors.
    Blose JM, Proctor DJ, Veeraraghavan N, Misra VK, Bevilacqua PC.
    J Am Chem Soc; 2009 Jun 24; 131(24):8474-84. PubMed ID: 19476351
    [Abstract] [Full Text] [Related]

  • 2. Portability of the GN(R)A hairpin loop motif between RNA and DNA.
    Blose JM, Lloyd KP, Bevilacqua PC.
    Biochemistry; 2009 Sep 22; 48(37):8787-94. PubMed ID: 19681609
    [Abstract] [Full Text] [Related]

  • 3. A network of heterogeneous hydrogen bonds in GNRA tetraloops.
    Jucker FM, Heus HA, Yip PF, Moors EH, Pardi A.
    J Mol Biol; 1996 Dec 20; 264(5):968-80. PubMed ID: 9000624
    [Abstract] [Full Text] [Related]

  • 4. Sequence dependence of the stability of RNA hairpin molecules with six nucleotide loops.
    Vecenie CJ, Morrow CV, Zyra A, Serra MJ.
    Biochemistry; 2006 Feb 07; 45(5):1400-7. PubMed ID: 16445282
    [Abstract] [Full Text] [Related]

  • 5. Effects of osmolytes on stable UUCG tetraloops and their preference for a CG closing base pair.
    Whittum ME, Blose JM.
    Nucleosides Nucleotides Nucleic Acids; 2017 Sep 02; 36(9):583-597. PubMed ID: 29035162
    [Abstract] [Full Text] [Related]

  • 6.
    ; . PubMed ID:
    [No Abstract] [Full Text] [Related]

  • 7.
    ; . PubMed ID:
    [No Abstract] [Full Text] [Related]

  • 8. Stability of RNA hairpins closed by wobble base pairs.
    Giese MR, Betschart K, Dale T, Riley CK, Rowan C, Sprouse KJ, Serra MJ.
    Biochemistry; 1998 Jan 27; 37(4):1094-100. PubMed ID: 9454601
    [Abstract] [Full Text] [Related]

  • 9. Thermodynamic coupling of the loop and stem in unusually stable DNA hairpins closed by CG base pairs.
    Moody EM, Bevilacqua PC.
    J Am Chem Soc; 2003 Feb 26; 125(8):2032-3. PubMed ID: 12590515
    [Abstract] [Full Text] [Related]

  • 10. Evidence that folding of an RNA tetraloop hairpin is less cooperative than its DNA counterpart.
    Moody EM, Feerrar JC, Bevilacqua PC.
    Biochemistry; 2004 Jun 29; 43(25):7992-8. PubMed ID: 15209494
    [Abstract] [Full Text] [Related]

  • 11. Experimental and computational studies of the G[UUCG]C RNA tetraloop.
    Williams DJ, Hall KB.
    J Mol Biol; 2000 Apr 14; 297(5):1045-61. PubMed ID: 10764572
    [Abstract] [Full Text] [Related]

  • 12. Dynamics and stability of GCAA tetraloops with 2-aminopurine and purine substitutions.
    Sarzynska J, Kulinski T.
    J Biomol Struct Dyn; 2005 Feb 14; 22(4):425-39. PubMed ID: 15588106
    [Abstract] [Full Text] [Related]

  • 13. Stability of RNA hairpin loops closed by AU base pairs.
    Vecenie CJ, Serra MJ.
    Biochemistry; 2004 Sep 21; 43(37):11813-7. PubMed ID: 15362866
    [Abstract] [Full Text] [Related]

  • 14. Effect of the number of nucleic acid oligomer charges on the salt dependence of stability (DeltaG 37degrees) and melting temperature (Tm): NLPB analysis of experimental data.
    Shkel IA, Record MT.
    Biochemistry; 2004 Jun 08; 43(22):7090-101. PubMed ID: 15170346
    [Abstract] [Full Text] [Related]

  • 15. The interpretation of Mg(2+) binding isotherms for nucleic acids using Poisson-Boltzmann theory.
    Misra VK, Draper DE.
    J Mol Biol; 1999 Dec 17; 294(5):1135-47. PubMed ID: 10600372
    [Abstract] [Full Text] [Related]

  • 16. Effects of osmolytes and macromolecular crowders on stable GAAA tetraloops and their preference for a CG closing base pair.
    Leonard KN, Blose JM.
    PeerJ; 2018 Dec 17; 6():e4236. PubMed ID: 29456882
    [Abstract] [Full Text] [Related]

  • 17. Structural features of the UCCG and UGCG tetraloops in very short hairpins as evidenced by optical spectroscopy.
    Abdelkafi M, Leulliot N, Baumruk V, Bednárová L, Turpin PY, Namane A, Gouyette C, Huynh-Dinh T, Ghomi M.
    Biochemistry; 1998 May 26; 37(21):7878-84. PubMed ID: 9601049
    [Abstract] [Full Text] [Related]

  • 18. Molecular dynamics simulation of the structure, dynamics, and thermostability of the RNA hairpins uCACGg and cUUCGg.
    Villa A, Widjajakusuma E, Stock G.
    J Phys Chem B; 2008 Jan 10; 112(1):134-42. PubMed ID: 18069816
    [Abstract] [Full Text] [Related]

  • 19. The energetics of small internal loops in RNA.
    Schroeder SJ, Burkard ME, Turner DH.
    Biopolymers; 2008 Jan 10; 52(4):157-67. PubMed ID: 11295748
    [Abstract] [Full Text] [Related]

  • 20. Counterion and polythymidine loop-length-dependent folding and thermodynamic stability of DNA hairpins reveal the unusual counterion-dependent stability of tetraloop hairpins.
    Nayak RK, Van Orden A.
    J Phys Chem B; 2013 Nov 14; 117(45):13956-66. PubMed ID: 24144397
    [Abstract] [Full Text] [Related]

    Page: [Next] [New Search]
    of 14.