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Journal Abstract Search

262 related items for PubMed ID: 19477994

  • 1. Domain-oriented edge-based alignment of protein interaction networks.
    Guo X, Hartemink AJ.
    Bioinformatics; 2009 Jun 15; 25(12):i240-6. PubMed ID: 19477994
    [Abstract] [Full Text] [Related]

  • 2. Global alignment of protein-protein interaction networks by graph matching methods.
    Zaslavskiy M, Bach F, Vert JP.
    Bioinformatics; 2009 Jun 15; 25(12):i259-67. PubMed ID: 19477997
    [Abstract] [Full Text] [Related]

  • 3. MAGNA: Maximizing Accuracy in Global Network Alignment.
    Saraph V, Milenković T.
    Bioinformatics; 2014 Oct 15; 30(20):2931-40. PubMed ID: 25015987
    [Abstract] [Full Text] [Related]

  • 4. Functionally guided alignment of protein interaction networks for module detection.
    Ali W, Deane CM.
    Bioinformatics; 2009 Dec 01; 25(23):3166-73. PubMed ID: 19797409
    [Abstract] [Full Text] [Related]

  • 5. DualAligner: a dual alignment-based strategy to align protein interaction networks.
    Seah BS, Bhowmick SS, Dewey CF.
    Bioinformatics; 2014 Sep 15; 30(18):2619-26. PubMed ID: 24872427
    [Abstract] [Full Text] [Related]

  • 6. Fuse: multiple network alignment via data fusion.
    Gligorijević V, Malod-Dognin N, Pržulj N.
    Bioinformatics; 2016 Apr 15; 32(8):1195-203. PubMed ID: 26668003
    [Abstract] [Full Text] [Related]

  • 7. PrimAlign: PageRank-inspired Markovian alignment for large biological networks.
    Kalecky K, Cho YR.
    Bioinformatics; 2018 Jul 01; 34(13):i537-i546. PubMed ID: 29949962
    [Abstract] [Full Text] [Related]

  • 8. Identifying conserved protein complexes between species by constructing interolog networks.
    Nguyen PV, Srihari S, Leong HW.
    BMC Bioinformatics; 2013 Jul 01; 14 Suppl 16(Suppl 16):S8. PubMed ID: 24564762
    [Abstract] [Full Text] [Related]

  • 9. LePrimAlign: local entropy-based alignment of PPI networks to predict conserved modules.
    Maskey S, Cho YR.
    BMC Genomics; 2019 Dec 24; 20(Suppl 9):964. PubMed ID: 31874635
    [Abstract] [Full Text] [Related]

  • 10. L-GRAAL: Lagrangian graphlet-based network aligner.
    Malod-Dognin N, Pržulj N.
    Bioinformatics; 2015 Jul 01; 31(13):2182-9. PubMed ID: 25725498
    [Abstract] [Full Text] [Related]

  • 11. Global alignment of protein-protein interaction networks.
    Mongiovì M, Sharan R.
    Methods Mol Biol; 2013 Jul 01; 939():21-34. PubMed ID: 23192538
    [Abstract] [Full Text] [Related]

  • 12. Identification of protein complexes by integrating multiple alignment of protein interaction networks.
    Ma CY, Chen YP, Berger B, Liao CS.
    Bioinformatics; 2017 Jun 01; 33(11):1681-1688. PubMed ID: 28130237
    [Abstract] [Full Text] [Related]

  • 13. IsoRankN: spectral methods for global alignment of multiple protein networks.
    Liao CS, Lu K, Baym M, Singh R, Berger B.
    Bioinformatics; 2009 Jun 15; 25(12):i253-8. PubMed ID: 19477996
    [Abstract] [Full Text] [Related]

  • 14. NetCoffee: a fast and accurate global alignment approach to identify functionally conserved proteins in multiple networks.
    Hu J, Kehr B, Reinert K.
    Bioinformatics; 2014 Feb 15; 30(4):540-8. PubMed ID: 24336806
    [Abstract] [Full Text] [Related]

  • 15. SiPAN: simultaneous prediction and alignment of protein-protein interaction networks.
    Alkan F, Erten C.
    Bioinformatics; 2015 Jul 15; 31(14):2356-63. PubMed ID: 25788620
    [Abstract] [Full Text] [Related]

  • 16. MAGNA++: Maximizing Accuracy in Global Network Alignment via both node and edge conservation.
    Vijayan V, Saraph V, Milenković T.
    Bioinformatics; 2015 Jul 15; 31(14):2409-11. PubMed ID: 25792552
    [Abstract] [Full Text] [Related]

  • 17. ConnectedAlign: a PPI network alignment method for identifying conserved protein complexes across multiple species.
    Gao J, Song B, Hu X, Yan F, Wang J.
    BMC Bioinformatics; 2018 Aug 13; 19(Suppl 9):286. PubMed ID: 30367584
    [Abstract] [Full Text] [Related]

  • 18. Joint Alignment of Multiple Protein-Protein Interaction Networks via Convex Optimization.
    Hashemifar S, Huang Q, Xu J.
    J Comput Biol; 2016 Nov 13; 23(11):903-911. PubMed ID: 27428933
    [Abstract] [Full Text] [Related]

  • 19. Triangular Alignment (TAME): A Tensor-Based Approach for Higher-Order Network Alignment.
    Mohammadi S, Gleich DF, Kolda TG, Grama A.
    IEEE/ACM Trans Comput Biol Bioinform; 2017 Nov 13; 14(6):1446-1458. PubMed ID: 27483461
    [Abstract] [Full Text] [Related]

  • 20. Knowledge-guided inference of domain-domain interactions from incomplete protein-protein interaction networks.
    Liu M, Chen XW, Jothi R.
    Bioinformatics; 2009 Oct 01; 25(19):2492-9. PubMed ID: 19667081
    [Abstract] [Full Text] [Related]

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