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Journal Abstract Search

168 related items for PubMed ID: 19630542

  • 1. Bootstrapping the interactome: unsupervised identification of protein complexes in yeast.
    Friedel CC, Krumsiek J, Zimmer R.
    J Comput Biol; 2009 Aug; 16(8):971-87. PubMed ID: 19630542
    [Abstract] [Full Text] [Related]

  • 2. A high-accuracy consensus map of yeast protein complexes reveals modular nature of gene essentiality.
    Hart GT, Lee I, Marcotte ER.
    BMC Bioinformatics; 2007 Jul 02; 8():236. PubMed ID: 17605818
    [Abstract] [Full Text] [Related]

  • 3. Identifying functional modules in the physical interactome of Saccharomyces cerevisiae.
    Pu S, Vlasblom J, Emili A, Greenblatt J, Wodak SJ.
    Proteomics; 2007 Mar 02; 7(6):944-60. PubMed ID: 17370254
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  • 4. Assessment of high-confidence protein-protein interactome in yeast.
    Karagoz K, Arga KY.
    Comput Biol Chem; 2013 Aug 02; 45():1-8. PubMed ID: 23608186
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  • 5. PIPE: a protein-protein interaction prediction engine based on the re-occurring short polypeptide sequences between known interacting protein pairs.
    Pitre S, Dehne F, Chan A, Cheetham J, Duong A, Emili A, Gebbia M, Greenblatt J, Jessulat M, Krogan N, Luo X, Golshani A.
    BMC Bioinformatics; 2006 Jul 27; 7():365. PubMed ID: 16872538
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  • 6. Protein-protein interactions.
    Williamson MP, Sutcliffe MJ.
    Biochem Soc Trans; 2010 Aug 27; 38(4):875-8. PubMed ID: 20658969
    [Abstract] [Full Text] [Related]

  • 7. MCL-CAw: a refinement of MCL for detecting yeast complexes from weighted PPI networks by incorporating core-attachment structure.
    Srihari S, Ning K, Leong HW.
    BMC Bioinformatics; 2010 Oct 12; 11():504. PubMed ID: 20939868
    [Abstract] [Full Text] [Related]

  • 8. Characterization and prediction of protein-protein interactions within and between complexes.
    Sprinzak E, Altuvia Y, Margalit H.
    Proc Natl Acad Sci U S A; 2006 Oct 03; 103(40):14718-23. PubMed ID: 17003128
    [Abstract] [Full Text] [Related]

  • 9. Systematic characterization of the protein interaction network and protein complexes in Saccharomyces cerevisiae using tandem affinity purification and mass spectrometry.
    Babu M, Krogan NJ, Awrey DE, Emili A, Greenblatt JF.
    Methods Mol Biol; 2009 Oct 03; 548():187-207. PubMed ID: 19521826
    [Abstract] [Full Text] [Related]

  • 10. The Cross-and-Capture system: a versatile tool in yeast proteomics.
    Suter B.
    Methods; 2012 Dec 03; 58(4):360-6. PubMed ID: 22836129
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  • 11. Computational detection of protein complexes in AP-MS experiments.
    Choi H.
    Proteomics; 2012 May 03; 12(10):1663-8. PubMed ID: 22711593
    [Abstract] [Full Text] [Related]

  • 12. Large-scale identification of yeast integral membrane protein interactions.
    Miller JP, Lo RS, Ben-Hur A, Desmarais C, Stagljar I, Noble WS, Fields S.
    Proc Natl Acad Sci U S A; 2005 Aug 23; 102(34):12123-8. PubMed ID: 16093310
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  • 15. AVID: an integrative framework for discovering functional relationships among proteins.
    Jiang T, Keating AE.
    BMC Bioinformatics; 2005 Jun 01; 6():136. PubMed ID: 15929793
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  • 16. Identifying protein complexes from interactome based on essential proteins and local fitness method.
    Wang J, Chen G, Liu B, Li M, Pan Y.
    IEEE Trans Nanobioscience; 2012 Dec 01; 11(4):324-35. PubMed ID: 22711784
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  • 20. Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering.
    Theofilatos K, Pavlopoulou N, Papasavvas C, Likothanassis S, Dimitrakopoulos C, Georgopoulos E, Moschopoulos C, Mavroudi S.
    Artif Intell Med; 2015 Mar 01; 63(3):181-9. PubMed ID: 25765008
    [Abstract] [Full Text] [Related]

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