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Journal Abstract Search

417 related items for PubMed ID: 19640161

  • 1. Genome-wide system analysis reveals stable yet flexible network dynamics in yeast.
    Gustafsson M, Hörnquist M, Björkegren J, Tegnér J.
    IET Syst Biol; 2009 Jul; 3(4):219-28. PubMed ID: 19640161
    [Abstract] [Full Text] [Related]

  • 2. The properties of hub proteins in a yeast-aggregated cell cycle network and its phase sub-networks.
    Wu X, Guo J, Zhang DY, Lin K.
    Proteomics; 2009 Oct; 9(20):4812-24. PubMed ID: 19743420
    [Abstract] [Full Text] [Related]

  • 3. Few crucial links assure checkpoint efficiency in the yeast cell-cycle network.
    Stoll G, Rougemont J, Naef F.
    Bioinformatics; 2006 Oct 15; 22(20):2539-46. PubMed ID: 16895923
    [Abstract] [Full Text] [Related]

  • 4. Integrated analysis of multiple data sources reveals modular structure of biological networks.
    Lu H, Shi B, Wu G, Zhang Y, Zhu X, Zhang Z, Liu C, Zhao Y, Wu T, Wang J, Chen R.
    Biochem Biophys Res Commun; 2006 Jun 23; 345(1):302-9. PubMed ID: 16690033
    [Abstract] [Full Text] [Related]

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  • 6. Statistical inference of transcriptional module-based gene networks from time course gene expression profiles by using state space models.
    Hirose O, Yoshida R, Imoto S, Yamaguchi R, Higuchi T, Charnock-Jones DS, Print C, Miyano S.
    Bioinformatics; 2008 Apr 01; 24(7):932-42. PubMed ID: 18292116
    [Abstract] [Full Text] [Related]

  • 7. A new framework for identifying combinatorial regulation of transcription factors: a case study of the yeast cell cycle.
    Wang J.
    J Biomed Inform; 2007 Dec 01; 40(6):707-25. PubMed ID: 17418646
    [Abstract] [Full Text] [Related]

  • 8. Connectivity in the yeast cell cycle transcription network: inferences from neural networks.
    Hart CE, Mjolsness E, Wold BJ.
    PLoS Comput Biol; 2006 Dec 22; 2(12):e169. PubMed ID: 17194216
    [Abstract] [Full Text] [Related]

  • 9. Stability of functions in Boolean models of gene regulatory networks.
    Rämö P, Kesseli J, Yli-Harja O.
    Chaos; 2005 Sep 22; 15(3):34101. PubMed ID: 16252995
    [Abstract] [Full Text] [Related]

  • 10. Function constrains network architecture and dynamics: a case study on the yeast cell cycle Boolean network.
    Lau KY, Ganguli S, Tang C.
    Phys Rev E Stat Nonlin Soft Matter Phys; 2007 May 22; 75(5 Pt 1):051907. PubMed ID: 17677098
    [Abstract] [Full Text] [Related]

  • 11. Modular organization of protein interaction networks.
    Luo F, Yang Y, Chen CF, Chang R, Zhou J, Scheuermann RH.
    Bioinformatics; 2007 Jan 15; 23(2):207-14. PubMed ID: 17092991
    [Abstract] [Full Text] [Related]

  • 12. Understanding signaling in yeast: Insights from network analysis.
    Arga KY, Onsan ZI, Kirdar B, Ulgen KO, Nielsen J.
    Biotechnol Bioeng; 2007 Aug 01; 97(5):1246-58. PubMed ID: 17252576
    [Abstract] [Full Text] [Related]

  • 13. Robustness and adaptation reveal plausible cell cycle controlling subnetwork in Saccharomyces cerevisiae.
    Huang JY, Huang CW, Kao KC, Lai PY.
    Gene; 2013 Apr 10; 518(1):35-41. PubMed ID: 23274654
    [Abstract] [Full Text] [Related]

  • 14. Superstability of the yeast cell-cycle dynamics: ensuring causality in the presence of biochemical stochasticity.
    Braunewell S, Bornholdt S.
    J Theor Biol; 2007 Apr 21; 245(4):638-43. PubMed ID: 17204290
    [Abstract] [Full Text] [Related]

  • 15. Identification of transcription factor cooperativity via stochastic system model.
    Chang YH, Wang YC, Chen BS.
    Bioinformatics; 2006 Sep 15; 22(18):2276-82. PubMed ID: 16844711
    [Abstract] [Full Text] [Related]

  • 16. Determination of critical network interactions: an augmented Boolean pseudo-dynamics approach.
    Soni AS, Jenkins JW, Sundaram SS.
    IET Syst Biol; 2008 Mar 15; 2(2):55-63. PubMed ID: 18397116
    [Abstract] [Full Text] [Related]

  • 17. Understanding gene essentiality by finely characterizing hubs in the yeast protein interaction network.
    Pang K, Sheng H, Ma X.
    Biochem Biophys Res Commun; 2010 Oct 08; 401(1):112-6. PubMed ID: 20833129
    [Abstract] [Full Text] [Related]

  • 18. Deconstructing the core dynamics from a complex time-lagged regulatory biological circuit.
    Eriksson O, Brinne B, Zhou Y, Björkegren J, Tegnér J.
    IET Syst Biol; 2009 Mar 08; 3(2):113-29. PubMed ID: 19292565
    [Abstract] [Full Text] [Related]

  • 19. ProtNet: a tool for stochastic simulations of protein interaction networks dynamics.
    Bernaschi M, Castiglione F, Ferranti A, Gavrila C, Tinti M, Cesareni G.
    BMC Bioinformatics; 2007 Mar 08; 8 Suppl 1(Suppl 1):S4. PubMed ID: 17430571
    [Abstract] [Full Text] [Related]

  • 20. Identification of metabolic units induced by environmental signals.
    Nacher JC, Schwartz JM, Kanehisa M, Akutsu T.
    Bioinformatics; 2006 Jul 15; 22(14):e375-83. PubMed ID: 16873496
    [Abstract] [Full Text] [Related]

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