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Journal Abstract Search

548 related items for PubMed ID: 19681609

  • 21. Stability difference between DNA and RNA mini-hairpins containing two G-C pairs.
    Hirao I, Kawai G, Kobayashi K, Nishimura Y, Miura K, Watanabe K, Ishido Y.
    Nucleic Acids Symp Ser; 1992; (27):127-8. PubMed ID: 1283900
    [Abstract] [Full Text] [Related]

  • 22. Improved parameters for the prediction of RNA hairpin stability.
    Serra MJ, Barnes TW, Betschart K, Gutierrez MJ, Sprouse KJ, Riley CK, Stewart L, Temel RE.
    Biochemistry; 1997 Apr 22; 36(16):4844-51. PubMed ID: 9125504
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  • 23. The RNA i-motif.
    Snoussi K, Nonin-Lecomte S, Leroy JL.
    J Mol Biol; 2001 May 25; 309(1):139-53. PubMed ID: 11491284
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  • 24. Solution structure of an RNA internal loop with three consecutive sheared GA pairs.
    Chen G, Znosko BM, Kennedy SD, Krugh TR, Turner DH.
    Biochemistry; 2005 Mar 01; 44(8):2845-56. PubMed ID: 15723528
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  • 25. Effects of osmolytes on stable UUCG tetraloops and their preference for a CG closing base pair.
    Whittum ME, Blose JM.
    Nucleosides Nucleotides Nucleic Acids; 2017 Sep 02; 36(9):583-597. PubMed ID: 29035162
    [Abstract] [Full Text] [Related]

  • 26. Counterion and polythymidine loop-length-dependent folding and thermodynamic stability of DNA hairpins reveal the unusual counterion-dependent stability of tetraloop hairpins.
    Nayak RK, Van Orden A.
    J Phys Chem B; 2013 Nov 14; 117(45):13956-66. PubMed ID: 24144397
    [Abstract] [Full Text] [Related]

  • 27. A thermodynamic study of unusually stable RNA and DNA hairpins.
    Antao VP, Lai SY, Tinoco I.
    Nucleic Acids Res; 1991 Nov 11; 19(21):5901-5. PubMed ID: 1719483
    [Abstract] [Full Text] [Related]

  • 28. UNAC tetraloops: to what extent do they mimic GNRA tetraloops?
    Zhao Q, Huang HC, Nagaswamy U, Xia Y, Gao X, Fox GE.
    Biopolymers; 2012 Aug 11; 97(8):617-28. PubMed ID: 22605553
    [Abstract] [Full Text] [Related]

  • 29. GNA trinucleotide loop sequences producing extraordinarily stable DNA minihairpins.
    Yoshizawa S, Kawai G, Watanabe K, Miura K, Hirao I.
    Biochemistry; 1997 Apr 22; 36(16):4761-7. PubMed ID: 9125496
    [Abstract] [Full Text] [Related]

  • 30. Factors affecting thermodynamic stabilities of RNA 3 x 3 internal loops.
    Chen G, Znosko BM, Jiao X, Turner DH.
    Biochemistry; 2004 Oct 12; 43(40):12865-76. PubMed ID: 15461459
    [Abstract] [Full Text] [Related]

  • 31. Achieving specificity in selected and wild-type N peptide-RNA complexes: the importance of discrimination against noncognate RNA targets.
    Barrick JE, Roberts RW.
    Biochemistry; 2003 Nov 11; 42(44):12998-3007. PubMed ID: 14596615
    [Abstract] [Full Text] [Related]

  • 32. Structure and folding dynamics of a DNA hairpin with a stabilising d(GNA) trinucleotide loop: influence of base pair mis-matches and point mutations on conformational equilibria.
    Balkwill GD, Williams HE, Searle MS.
    Org Biomol Chem; 2007 Mar 07; 5(5):832-9. PubMed ID: 17315071
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  • 33. Molecular dynamics simulation of the structure, dynamics, and thermostability of the RNA hairpins uCACGg and cUUCGg.
    Villa A, Widjajakusuma E, Stock G.
    J Phys Chem B; 2008 Jan 10; 112(1):134-42. PubMed ID: 18069816
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  • 34. On the relative ability of centromeric GNA triplets to form hairpins versus self-paired duplexes.
    Chou SH, Zhu L, Reid BR.
    J Mol Biol; 1996 Jun 14; 259(3):445-57. PubMed ID: 8676380
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  • 35. Mg(2+) binding to tRNA revisited: the nonlinear Poisson-Boltzmann model.
    Misra VK, Draper DE.
    J Mol Biol; 2000 Jun 09; 299(3):813-25. PubMed ID: 10835286
    [Abstract] [Full Text] [Related]

  • 36. Continuum solvent studies of the stability of RNA hairpin loops and helices.
    Srinivasan J, Miller J, Kollman PA, Case DA.
    J Biomol Struct Dyn; 1998 Dec 09; 16(3):671-82. PubMed ID: 10052623
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  • 37. The interpretation of Mg(2+) binding isotherms for nucleic acids using Poisson-Boltzmann theory.
    Misra VK, Draper DE.
    J Mol Biol; 1999 Dec 17; 294(5):1135-47. PubMed ID: 10600372
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  • 38. The energetics of small internal loops in RNA.
    Schroeder SJ, Burkard ME, Turner DH.
    Biopolymers; 1999 Dec 17; 52(4):157-67. PubMed ID: 11295748
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  • 39. The crystal structure of UUCG tetraloop.
    Ennifar E, Nikulin A, Tishchenko S, Serganov A, Nevskaya N, Garber M, Ehresmann B, Ehresmann C, Nikonov S, Dumas P.
    J Mol Biol; 2000 Nov 17; 304(1):35-42. PubMed ID: 11071808
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  • 40. Mapping the Universe of RNA Tetraloop Folds.
    Bottaro S, Lindorff-Larsen K.
    Biophys J; 2017 Jul 25; 113(2):257-267. PubMed ID: 28673616
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