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Journal Abstract Search

240 related items for PubMed ID: 19775152

  • 1. PTMSearchPlus: software tool for automated protein identification and post-translational modification characterization by integrating accurate intact protein mass and bottom-up mass spectrometric data searches.
    Kertesz V, Connelly HM, Erickson BK, Hettich RL.
    Anal Chem; 2009 Oct 15; 81(20):8387-95. PubMed ID: 19775152
    [Abstract] [Full Text] [Related]

  • 2. Software eyes for protein post-translational modifications.
    Na S, Paek E.
    Mass Spectrom Rev; 2015 Oct 15; 34(2):133-47. PubMed ID: 24889695
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  • 3. DBDigger: reorganized proteomic database identification that improves flexibility and speed.
    Tabb DL, Narasimhan C, Strader MB, Hettich RL.
    Anal Chem; 2005 Apr 15; 77(8):2464-74. PubMed ID: 15828782
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  • 4. Global Identification of Protein Post-translational Modifications in a Single-Pass Database Search.
    Shortreed MR, Wenger CD, Frey BL, Sheynkman GM, Scalf M, Keller MP, Attie AD, Smith LM.
    J Proteome Res; 2015 Nov 06; 14(11):4714-20. PubMed ID: 26418581
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  • 5. PIPI2: Sensitive Tag-Based Database Search to Identify Peptides with Multiple Post-translational Modifications.
    Lai S, Zhao P, Zhou C, Li N, Yu W.
    J Proteome Res; 2024 Jun 07; 23(6):1960-1969. PubMed ID: 38770571
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  • 12. Hunting for unexpected post-translational modifications by spectral library searching with tier-wise scoring.
    Ma CW, Lam H.
    J Proteome Res; 2014 May 02; 13(5):2262-71. PubMed ID: 24661115
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  • 13. Effectively addressing complex proteomic search spaces with peptide spectrum matching.
    Borges D, Perez-Riverol Y, Nogueira FC, Domont GB, Noda J, da Veiga Leprevost F, Besada V, França FM, Barbosa VC, Sánchez A, Carvalho PC.
    Bioinformatics; 2013 May 15; 29(10):1343-4. PubMed ID: 23446294
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  • 14. Baking a mass-spectrometry data PIE with McMC and simulated annealing: predicting protein post-translational modifications from integrated top-down and bottom-up data.
    Jefferys SR, Giddings MC.
    Bioinformatics; 2011 Mar 15; 27(6):844-52. PubMed ID: 21389073
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  • 16. Identification of post-translational modifications by blind search of mass spectra.
    Tsur D, Tanner S, Zandi E, Bafna V, Pevzner PA.
    Nat Biotechnol; 2005 Dec 15; 23(12):1562-7. PubMed ID: 16311586
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  • 20. Web and database software for identification of intact proteins using "top down" mass spectrometry.
    Taylor GK, Kim YB, Forbes AJ, Meng F, McCarthy R, Kelleher NL.
    Anal Chem; 2003 Aug 15; 75(16):4081-6. PubMed ID: 14632120
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