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Journal Abstract Search

189 related items for PubMed ID: 19900289

  • 1. An empirical Bayesian approach for model-based inference of cellular signaling networks.
    Klinke DJ.
    BMC Bioinformatics; 2009 Nov 09; 10():371. PubMed ID: 19900289
    [Abstract] [Full Text] [Related]

  • 2. Causal inference in biomolecular pathways using a Bayesian network approach and an Implicit method.
    Ben Hassen H, Masmoudi A, Rebai A.
    J Theor Biol; 2008 Aug 21; 253(4):717-24. PubMed ID: 18541271
    [Abstract] [Full Text] [Related]

  • 3. A Probabilistic Framework for Molecular Network Structure Inference by Means of Mechanistic Modeling.
    Timonen J, Mannerstrom H, Lahdesmaki H, Intosalmi J.
    IEEE/ACM Trans Comput Biol Bioinform; 2019 Aug 21; 16(6):1843-1854. PubMed ID: 29993837
    [Abstract] [Full Text] [Related]

  • 4. High-dimensional Bayesian parameter estimation: case study for a model of JAK2/STAT5 signaling.
    Hug S, Raue A, Hasenauer J, Bachmann J, Klingmüller U, Timmer J, Theis FJ.
    Math Biosci; 2013 Dec 21; 246(2):293-304. PubMed ID: 23602931
    [Abstract] [Full Text] [Related]

  • 5. Markov chain Monte Carlo simulation of a Bayesian mixture model for gene network inference.
    Ko Y, Kim J, Rodriguez-Zas SL.
    Genes Genomics; 2019 May 21; 41(5):547-555. PubMed ID: 30741379
    [Abstract] [Full Text] [Related]

  • 6. Inferring signaling pathway topologies from multiple perturbation measurements of specific biochemical species.
    Xu TR, Vyshemirsky V, Gormand A, von Kriegsheim A, Girolami M, Baillie GS, Ketley D, Dunlop AJ, Milligan G, Houslay MD, Kolch W.
    Sci Signal; 2010 Mar 16; 3(113):ra20. PubMed ID: 20234003
    [Abstract] [Full Text] [Related]

  • 7. A directed protein interaction network for investigating intracellular signal transduction.
    Vinayagam A, Stelzl U, Foulle R, Plassmann S, Zenkner M, Timm J, Assmus HE, Andrade-Navarro MA, Wanker EE.
    Sci Signal; 2011 Sep 06; 4(189):rs8. PubMed ID: 21900206
    [Abstract] [Full Text] [Related]

  • 8. Inferring signaling pathways with probabilistic programming.
    Merrell D, Gitter A.
    Bioinformatics; 2020 Dec 30; 36(Suppl_2):i822-i830. PubMed ID: 33381832
    [Abstract] [Full Text] [Related]

  • 9. Network inference using informative priors.
    Mukherjee S, Speed TP.
    Proc Natl Acad Sci U S A; 2008 Sep 23; 105(38):14313-8. PubMed ID: 18799736
    [Abstract] [Full Text] [Related]

  • 10. Dynamic probabilistic threshold networks to infer signaling pathways from time-course perturbation data.
    Kiani NA, Kaderali L.
    BMC Bioinformatics; 2014 Jul 22; 15(1):250. PubMed ID: 25047753
    [Abstract] [Full Text] [Related]

  • 11. Using complexity for the estimation of Bayesian networks.
    Salzman P, Almudevar A.
    Stat Appl Genet Mol Biol; 2006 Jul 22; 5():Article21. PubMed ID: 17049032
    [Abstract] [Full Text] [Related]

  • 12. Inference of regulatory networks with a convergence improved MCMC sampler.
    Agostinho NB, Machado KS, Werhli AV.
    BMC Bioinformatics; 2015 Sep 24; 16():306. PubMed ID: 26399857
    [Abstract] [Full Text] [Related]

  • 13. Expectation propagation for large scale Bayesian inference of non-linear molecular networks from perturbation data.
    Narimani Z, Beigy H, Ahmad A, Masoudi-Nejad A, Fröhlich H.
    PLoS One; 2017 Sep 24; 12(2):e0171240. PubMed ID: 28166542
    [Abstract] [Full Text] [Related]

  • 14. Causal inference in biology networks with integrated belief propagation.
    Chang R, Karr JR, Schadt EE.
    Pac Symp Biocomput; 2015 Sep 24; ():359-70. PubMed ID: 25592596
    [Abstract] [Full Text] [Related]

  • 15. Bayesian Computation Methods for Inferring Regulatory Network Models Using Biomedical Data.
    Tian T.
    Adv Exp Med Biol; 2016 Sep 24; 939():289-307. PubMed ID: 27807752
    [Abstract] [Full Text] [Related]

  • 16. A full bayesian approach for boolean genetic network inference.
    Han S, Wong RK, Lee TC, Shen L, Li SY, Fan X.
    PLoS One; 2014 Sep 24; 9(12):e115806. PubMed ID: 25551820
    [Abstract] [Full Text] [Related]

  • 17. Bayesian Markov Random Field analysis for protein function prediction based on network data.
    Kourmpetis YA, van Dijk AD, Bink MC, van Ham RC, ter Braak CJ.
    PLoS One; 2010 Feb 24; 5(2):e9293. PubMed ID: 20195360
    [Abstract] [Full Text] [Related]

  • 18. An introduction to Gaussian Bayesian networks.
    Grzegorczyk M.
    Methods Mol Biol; 2010 Feb 24; 662():121-47. PubMed ID: 20824469
    [Abstract] [Full Text] [Related]

  • 19. Inferring cellular regulatory networks with Bayesian model averaging for linear regression (BMALR).
    Huang X, Zi Z.
    Mol Biosyst; 2014 Aug 24; 10(8):2023-30. PubMed ID: 24899235
    [Abstract] [Full Text] [Related]

  • 20. A hierarchical model for integrating unsupervised generative embedding and empirical Bayes.
    Raman S, Deserno L, Schlagenhauf F, Stephan KE.
    J Neurosci Methods; 2016 Aug 30; 269():6-20. PubMed ID: 27141854
    [Abstract] [Full Text] [Related]

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