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Journal Abstract Search

225 related items for PubMed ID: 20088566

  • 1. pH-dependent pKa values in proteins--a theoretical analysis of protonation energies with practical consequences for enzymatic reactions.
    Bombarda E, Ullmann GM.
    J Phys Chem B; 2010 Feb 11; 114(5):1994-2003. PubMed ID: 20088566
    [Abstract] [Full Text] [Related]

  • 2. Characterization of pKa values and titration shifts in the cytotoxic ribonuclease alpha-sarcin by NMR. Relationship between electrostatic interactions, structure, and catalytic function.
    Pérez-Cañadillas JM, Campos-Olivas R, Lacadena J, Martínez del Pozo A, Gavilanes JG, Santoro J, Rico M, Bruix M.
    Biochemistry; 1998 Nov 10; 37(45):15865-76. PubMed ID: 9843392
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  • 3. pH dependence of binding reactions from free energy simulations and macroscopic continuum electrostatic calculations: application to 2'GMP/3'GMP binding to ribonuclease T1 and implications for catalysis.
    MacKerell AD, Sommer MS, Karplus M.
    J Mol Biol; 1995 Apr 07; 247(4):774-807. PubMed ID: 7723031
    [Abstract] [Full Text] [Related]

  • 4. Determination of electrostatic interaction energies and protonation state populations in enzyme active sites.
    Søndergaard CR, McIntosh LP, Pollastri G, Nielsen JE.
    J Mol Biol; 2008 Feb 08; 376(1):269-87. PubMed ID: 18155242
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  • 5. Dissecting the electrostatic interactions and pH-dependent activity of a family 11 glycosidase.
    Joshi MD, Sidhu G, Nielsen JE, Brayer GD, Withers SG, McIntosh LP.
    Biochemistry; 2001 Aug 28; 40(34):10115-39. PubMed ID: 11513590
    [Abstract] [Full Text] [Related]

  • 6. Analyzing enzymatic pH activity profiles and protein titration curves using structure-based pKa calculations and titration curve fitting.
    Nielsen JE.
    Methods Enzymol; 2009 Aug 28; 454():233-58. PubMed ID: 19216929
    [Abstract] [Full Text] [Related]

  • 7. Dissecting structural and electrostatic interactions of charged groups in alpha-sarcin. An NMR study of some mutants involving the catalytic residues.
    García-Mayoral MF, Pérez-Cañadillas JM, Santoro J, Ibarra-Molero B, Sanchez-Ruiz JM, Lacadena J, Martínez del Pozo A, Gavilanes JG, Rico M, Bruix M.
    Biochemistry; 2003 Nov 18; 42(45):13122-33. PubMed ID: 14609322
    [Abstract] [Full Text] [Related]

  • 8. On the pH dependence of protein stability.
    Yang AS, Honig B.
    J Mol Biol; 1993 May 20; 231(2):459-74. PubMed ID: 8510157
    [Abstract] [Full Text] [Related]

  • 9. Characterization of the pH titration shifts of ribonuclease A by one- and two-dimensional nuclear magnetic resonance spectroscopy.
    Baker WR, Kintanar A.
    Arch Biochem Biophys; 1996 Mar 01; 327(1):189-99. PubMed ID: 8615690
    [Abstract] [Full Text] [Related]

  • 10. Protein-protein binding is often associated with changes in protonation state.
    Mason AC, Jensen JH.
    Proteins; 2008 Apr 01; 71(1):81-91. PubMed ID: 17932920
    [Abstract] [Full Text] [Related]

  • 11. Characterization of micros-ms dynamics of proteins using a combined analysis of 15N NMR relaxation and chemical shift: conformational exchange in plastocyanin induced by histidine protonations.
    Hass MA, Thuesen MH, Christensen HE, Led JJ.
    J Am Chem Soc; 2004 Jan 28; 126(3):753-65. PubMed ID: 14733549
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  • 15. The roles of active-site residues in the catalytic mechanism of trans-3-chloroacrylic acid dehalogenase: a kinetic, NMR, and mutational analysis.
    Azurmendi HF, Wang SC, Massiah MA, Poelarends GJ, Whitman CP, Mildvan AS.
    Biochemistry; 2004 Apr 13; 43(14):4082-91. PubMed ID: 15065850
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  • 18. Acid-base equilibria in rhodopsin: dependence of the protonation state of glu134 on its environment.
    Periole X, Ceruso MA, Mehler EL.
    Biochemistry; 2004 Jun 08; 43(22):6858-64. PubMed ID: 15170322
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  • 20. Kinetics and mechanism of the acid transition of the active site in plastocyanin.
    Hass MA, Christensen HE, Zhang J, Led JJ.
    Biochemistry; 2007 Dec 18; 46(50):14619-28. PubMed ID: 18020375
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