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Journal Abstract Search

204 related items for PubMed ID: 20187083

  • 1. Speeding up tandem mass spectrometry based database searching by peptide and spectrum indexing.
    Li Y, Chi H, Wang LH, Wang HP, Fu Y, Yuan ZF, Li SJ, Liu YS, Sun RX, Zeng R, He SM.
    Rapid Commun Mass Spectrom; 2010 Mar; 24(6):807-14. PubMed ID: 20187083
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  • 5. VEMS 3.0: algorithms and computational tools for tandem mass spectrometry based identification of post-translational modifications in proteins.
    Matthiesen R, Trelle MB, Højrup P, Bunkenborg J, Jensen ON.
    J Proteome Res; 2005 Mar; 4(6):2338-47. PubMed ID: 16335983
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  • 6. Protein identification from tandem mass spectra by database searching.
    Edwards NJ.
    Methods Mol Biol; 2011 Mar; 694():119-38. PubMed ID: 21082432
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  • 7. Accelerating the scoring module of mass spectrometry-based peptide identification using GPUs.
    Li Y, Chi H, Xia L, Chu X.
    BMC Bioinformatics; 2014 Apr 28; 15():121. PubMed ID: 24773593
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  • 9. Integrated approach for manual evaluation of peptides identified by searching protein sequence databases with tandem mass spectra.
    Chen Y, Kwon SW, Kim SC, Zhao Y.
    J Proteome Res; 2005 Apr 28; 4(3):998-1005. PubMed ID: 15952748
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  • 10. PeaksPTM: Mass spectrometry-based identification of peptides with unspecified modifications.
    Han X, He L, Xin L, Shan B, Ma B.
    J Proteome Res; 2011 Jul 01; 10(7):2930-6. PubMed ID: 21609001
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  • 12. Cloud parallel processing of tandem mass spectrometry based proteomics data.
    Mohammed Y, Mostovenko E, Henneman AA, Marissen RJ, Deelder AM, Palmblad M.
    J Proteome Res; 2012 Oct 05; 11(10):5101-8. PubMed ID: 22916831
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  • 14. Faster SEQUEST searching for peptide identification from tandem mass spectra.
    Diament BJ, Noble WS.
    J Proteome Res; 2011 Sep 02; 10(9):3871-9. PubMed ID: 21761931
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  • 16. Prediction of novel modifications by unrestrictive search of tandem mass spectra.
    Na S, Paek E.
    J Proteome Res; 2009 Oct 02; 8(10):4418-27. PubMed ID: 19658439
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  • 18. Semi-supervised learning for peptide identification from shotgun proteomics datasets.
    Käll L, Canterbury JD, Weston J, Noble WS, MacCoss MJ.
    Nat Methods; 2007 Nov 02; 4(11):923-5. PubMed ID: 17952086
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