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Journal Abstract Search

176 related items for PubMed ID: 20189940

  • 1. A min-cut algorithm for the consistency problem in multiple sequence alignment.
    Corel E, Pitschi F, Morgenstern B.
    Bioinformatics; 2010 Apr 15; 26(8):1015-21. PubMed ID: 20189940
    [Abstract] [Full Text] [Related]

  • 2. An iterative refinement algorithm for consistency based multiple structural alignment methods.
    Chen Y, Crippen GM.
    Bioinformatics; 2006 Sep 01; 22(17):2087-93. PubMed ID: 16809393
    [Abstract] [Full Text] [Related]

  • 3. An adaptive and iterative algorithm for refining multiple sequence alignment.
    Wang Y, Li KB.
    Comput Biol Chem; 2004 Apr 01; 28(2):141-8. PubMed ID: 15130542
    [Abstract] [Full Text] [Related]

  • 4. Efficient estimation of pairwise distances between genomes.
    Domazet-Loso M, Haubold B.
    Bioinformatics; 2009 Dec 15; 25(24):3221-7. PubMed ID: 19825795
    [Abstract] [Full Text] [Related]

  • 5. DIALIGN-T: an improved algorithm for segment-based multiple sequence alignment.
    Subramanian AR, Weyer-Menkhoff J, Kaufmann M, Morgenstern B.
    BMC Bioinformatics; 2005 Mar 22; 6():66. PubMed ID: 15784139
    [Abstract] [Full Text] [Related]

  • 6. Sigma: multiple alignment of weakly-conserved non-coding DNA sequence.
    Siddharthan R.
    BMC Bioinformatics; 2006 Mar 16; 7():143. PubMed ID: 16542424
    [Abstract] [Full Text] [Related]

  • 7. Probalign: multiple sequence alignment using partition function posterior probabilities.
    Roshan U, Livesay DR.
    Bioinformatics; 2006 Nov 15; 22(22):2715-21. PubMed ID: 16954142
    [Abstract] [Full Text] [Related]

  • 8. Ancestral sequence alignment under optimal conditions.
    Hudek AK, Brown DG.
    BMC Bioinformatics; 2005 Nov 17; 6():273. PubMed ID: 16293191
    [Abstract] [Full Text] [Related]

  • 9. Improvement in accuracy of multiple sequence alignment using novel group-to-group sequence alignment algorithm with piecewise linear gap cost.
    Yamada S, Gotoh O, Yamana H.
    BMC Bioinformatics; 2006 Dec 01; 7():524. PubMed ID: 17137519
    [Abstract] [Full Text] [Related]

  • 10. Multiple alignment by sequence annealing.
    Schwartz AS, Pachter L.
    Bioinformatics; 2007 Jan 15; 23(2):e24-9. PubMed ID: 17237099
    [Abstract] [Full Text] [Related]

  • 11. Multiple alignment of genomic sequences using CHAOS, DIALIGN and ABC.
    Pöhler D, Werner N, Steinkamp R, Morgenstern B.
    Nucleic Acids Res; 2005 Jul 01; 33(Web Server issue):W532-4. PubMed ID: 15980528
    [Abstract] [Full Text] [Related]

  • 12. A local multiple alignment method for detection of non-coding RNA sequences.
    Tabei Y, Asai K.
    Bioinformatics; 2009 Jun 15; 25(12):1498-505. PubMed ID: 19376823
    [Abstract] [Full Text] [Related]

  • 13. MUSTANG: a multiple structural alignment algorithm.
    Konagurthu AS, Whisstock JC, Stuckey PJ, Lesk AM.
    Proteins; 2006 Aug 15; 64(3):559-74. PubMed ID: 16736488
    [Abstract] [Full Text] [Related]

  • 14. CentroidAlign: fast and accurate aligner for structured RNAs by maximizing expected sum-of-pairs score.
    Hamada M, Sato K, Kiryu H, Mituyama T, Asai K.
    Bioinformatics; 2009 Dec 15; 25(24):3236-43. PubMed ID: 19808876
    [Abstract] [Full Text] [Related]

  • 15. Multiple alignment by aligning alignments.
    Wheeler TJ, Kececioglu JD.
    Bioinformatics; 2007 Jul 01; 23(13):i559-68. PubMed ID: 17646343
    [Abstract] [Full Text] [Related]

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  • 18. Incremental window-based protein sequence alignment algorithms.
    Rangwala H, Karypis G.
    Bioinformatics; 2007 Jan 15; 23(2):e17-23. PubMed ID: 17237087
    [Abstract] [Full Text] [Related]

  • 19. The CHAOS/DIALIGN WWW server for multiple alignment of genomic sequences.
    Brudno M, Steinkamp R, Morgenstern B.
    Nucleic Acids Res; 2004 Jul 01; 32(Web Server issue):W41-4. PubMed ID: 15215346
    [Abstract] [Full Text] [Related]

  • 20. Accurate anchoring alignment of divergent sequences.
    Huang W, Umbach DM, Li L.
    Bioinformatics; 2006 Jan 01; 22(1):29-34. PubMed ID: 16301203
    [Abstract] [Full Text] [Related]

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