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Journal Abstract Search

192 related items for PubMed ID: 20199108

  • 21.
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  • 23. Partially sequenced organisms, decoy searches and false discovery rates.
    Victor B, Gabriël S, Kanobana K, Mostovenko E, Polman K, Dorny P, Deelder AM, Palmblad M.
    J Proteome Res; 2012 Mar 02; 11(3):1991-5. PubMed ID: 22339108
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  • 25. Proteome analysis of Sorangium cellulosum employing 2D-HPLC-MS/MS and improved database searching strategies for CID and ETD fragment spectra.
    Leinenbach A, Hartmer R, Lubeck M, Kneissl B, Elnakady YA, Baessmann C, Müller R, Huber CG.
    J Proteome Res; 2009 Sep 02; 8(9):4350-61. PubMed ID: 19634914
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  • 26. MUMAL2: Improving sensitivity in shotgun proteomics using cost sensitive artificial neural networks and a threshold selector algorithm.
    Cerqueira FR, Ricardo AM, de Paiva Oliveira A, Graber A, Baumgartner C.
    BMC Bioinformatics; 2016 Dec 15; 17(Suppl 18):472. PubMed ID: 28105913
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  • 28. Automatic validation of phosphopeptide identifications by the MS2/MS3 target-decoy search strategy.
    Jiang X, Han G, Feng S, Jiang X, Ye M, Yao X, Zou H.
    J Proteome Res; 2008 Apr 15; 7(4):1640-9. PubMed ID: 18314942
    [Abstract] [Full Text] [Related]

  • 29. Interrogation of MS/MS search data with an pI Filter algorithm to increase protein identification success.
    Uwaje NC, Mueller NS, Maccarrone G, Turck CW.
    Electrophoresis; 2007 Jun 15; 28(12):1867-74. PubMed ID: 17516581
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  • 31. Statistical models for protein validation using tandem mass spectral data and protein amino acid sequence databases.
    Sadygov RG, Liu H, Yates JR.
    Anal Chem; 2004 Mar 15; 76(6):1664-71. PubMed ID: 15018565
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  • 34. Spectral library searching for peptide identification via tandem MS.
    Lam H, Aebersold R.
    Methods Mol Biol; 2010 Mar 15; 604():95-103. PubMed ID: 20013366
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  • 35. Mining proteomic MS/MS data for MRM transitions.
    Chem Mead JA, Bianco L, Bessant C.
    Methods Mol Biol; 2010 Mar 15; 604():187-99. PubMed ID: 20013372
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  • 36. Peptide retention prediction applied to proteomic data analysis.
    Gilar M, Jaworski A, Olivova P, Gebler JC.
    Rapid Commun Mass Spectrom; 2007 Mar 15; 21(17):2813-21. PubMed ID: 17663486
    [Abstract] [Full Text] [Related]

  • 37. Semi-supervised learning for peptide identification from shotgun proteomics datasets.
    Käll L, Canterbury JD, Weston J, Noble WS, MacCoss MJ.
    Nat Methods; 2007 Nov 15; 4(11):923-5. PubMed ID: 17952086
    [Abstract] [Full Text] [Related]

  • 38. Improved quantitative analysis of mass spectrometry using quadratic equations.
    Yoon JY, Lim KY, Lee S, Park K, Paek E, Kang UB, Yeom J, Lee C.
    J Proteome Res; 2010 May 07; 9(5):2775-85. PubMed ID: 20329765
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  • 39. A new strategy to filter out false positive identifications of peptides in SEQUEST database search results.
    Zhang J, Li J, Xie H, Zhu Y, He F.
    Proteomics; 2007 Nov 07; 7(22):4036-44. PubMed ID: 17952874
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  • 40. An evaluation, comparison, and accurate benchmarking of several publicly available MS/MS search algorithms: sensitivity and specificity analysis.
    Kapp EA, Schütz F, Connolly LM, Chakel JA, Meza JE, Miller CA, Fenyo D, Eng JK, Adkins JN, Omenn GS, Simpson RJ.
    Proteomics; 2005 Aug 07; 5(13):3475-90. PubMed ID: 16047398
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