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Journal Abstract Search

139 related items for PubMed ID: 20357982

  • 1. The comparison of different pre- and post-analysis filters for determination of exon-level alternative splicing events using Affymetrix arrays.
    Whistler T, Chiang CF, Lin JM, Lonergan W, Reeves WC.
    J Biomol Tech; 2010 Apr; 21(1):44-53. PubMed ID: 20357982
    [Abstract] [Full Text] [Related]

  • 2. Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.
    Ha KCh, Coulombe-Huntington J, Majewski J.
    BMC Genomics; 2009 Nov 12; 10():519. PubMed ID: 19909511
    [Abstract] [Full Text] [Related]

  • 3.
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    [No Abstract] [Full Text] [Related]

  • 4. Exon array analysis using re-defined probe sets results in reliable identification of alternatively spliced genes in non-small cell lung cancer.
    Langer W, Sohler F, Leder G, Beckmann G, Seidel H, Gröne J, Hummel M, Sommer A.
    BMC Genomics; 2010 Nov 30; 11():676. PubMed ID: 21118496
    [Abstract] [Full Text] [Related]

  • 5. A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.
    Fan W, Khalid N, Hallahan AR, Olson JM, Zhao LP.
    Theor Biol Med Model; 2006 Apr 07; 3():19. PubMed ID: 16603076
    [Abstract] [Full Text] [Related]

  • 6. Gene expression and isoform variation analysis using Affymetrix Exon Arrays.
    Bemmo A, Benovoy D, Kwan T, Gaffney DJ, Jensen RV, Majewski J.
    BMC Genomics; 2008 Nov 07; 9():529. PubMed ID: 18990248
    [Abstract] [Full Text] [Related]

  • 7. MADS+: discovery of differential splicing events from Affymetrix exon junction array data.
    Shen S, Warzecha CC, Carstens RP, Xing Y.
    Bioinformatics; 2010 Jan 15; 26(2):268-9. PubMed ID: 19933160
    [Abstract] [Full Text] [Related]

  • 8. Overestimation of alternative splicing caused by variable probe characteristics in exon arrays.
    Gaidatzis D, Jacobeit K, Oakeley EJ, Stadler MB.
    Nucleic Acids Res; 2009 Sep 15; 37(16):e107. PubMed ID: 19528075
    [Abstract] [Full Text] [Related]

  • 9. Implementation of exon arrays: alternative splicing during T-cell proliferation as determined by whole genome analysis.
    Whistler T, Chiang CF, Lonergan W, Hollier M, Unger ER.
    BMC Genomics; 2010 Sep 14; 11():496. PubMed ID: 20840771
    [Abstract] [Full Text] [Related]

  • 10. Dissecting an alternative splicing analysis workflow for GeneChip Exon 1.0 ST Affymetrix arrays.
    Della Beffa C, Cordero F, Calogero RA.
    BMC Genomics; 2008 Nov 28; 9():571. PubMed ID: 19040723
    [Abstract] [Full Text] [Related]

  • 11. Different effects of the probe summarization algorithms PLIER and RMA on high-level analysis of Affymetrix exon arrays.
    Qu Y, He F, Chen Y.
    BMC Bioinformatics; 2010 Apr 28; 11():211. PubMed ID: 20426803
    [Abstract] [Full Text] [Related]

  • 12. Prediction of alternatively skipped exons and splicing enhancers from exon junction arrays.
    Kechris K, Yang YH, Yeh RF.
    BMC Genomics; 2008 Nov 20; 9():551. PubMed ID: 19021909
    [Abstract] [Full Text] [Related]

  • 13. Probe-level estimation improves the detection of differential splicing in Affymetrix exon array studies.
    Laajala E, Aittokallio T, Lahesmaa R, Elo LL.
    Genome Biol; 2009 Nov 20; 10(7):R77. PubMed ID: 19607685
    [Abstract] [Full Text] [Related]

  • 14. The Usage of Exon-Exon Splice Junctions for the Detection of Alternative Splicing using the REIDS model.
    Van Moerbeke M, Kasim A, Shkedy Z.
    Sci Rep; 2018 May 29; 8(1):8331. PubMed ID: 29844567
    [Abstract] [Full Text] [Related]

  • 15. A statistical framework for genome-wide discovery of biomarker splice variations with GeneChip Human Exon 1.0 ST Arrays.
    Yoshida R, Numata K, Imoto S, Nagasaki M, Doi A, Ueno K, Miyano S.
    Genome Inform; 2006 May 29; 17(1):88-99. PubMed ID: 17503359
    [Abstract] [Full Text] [Related]

  • 16. Molecular biology: alternative arrays.
    Turner R.
    Nature; 2002 Apr 11; 416(6881):593. PubMed ID: 11948335
    [No Abstract] [Full Text] [Related]

  • 17. Determination of alternate splicing events using the Affymetrix Exon 1.0 ST arrays.
    Subbaram S, Kuentzel M, Frank D, Dipersio CM, Chittur SV.
    Methods Mol Biol; 2010 Apr 11; 632():63-72. PubMed ID: 20217571
    [Abstract] [Full Text] [Related]

  • 18. Splicy: a web-based tool for the prediction of possible alternative splicing events from Affymetrix probeset data.
    Rambaldi D, Felice B, Praz V, Bucher P, Cittaro D, Guffanti A.
    BMC Bioinformatics; 2007 Mar 08; 8 Suppl 1(Suppl 1):S17. PubMed ID: 17430561
    [Abstract] [Full Text] [Related]

  • 19. SplicerEX: a tool for the automated detection and classification of mRNA changes from conventional and splice-sensitive microarray expression data.
    Robinson TJ, Forte E, Salinas RE, Puri S, Marengo M, Garcia-Blanco MA, Luftig MA.
    RNA; 2012 Aug 08; 18(8):1435-45. PubMed ID: 22736799
    [Abstract] [Full Text] [Related]

  • 20. RASA: Robust Alternative Splicing Analysis for Human Transcriptome Arrays.
    Seok J, Xu W, Davis RW, Xiao W.
    Sci Rep; 2015 Jul 06; 5():11917. PubMed ID: 26145443
    [Abstract] [Full Text] [Related]

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