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PUBMED FOR HANDHELDS

Journal Abstract Search


350 related items for PubMed ID: 20444259

  • 1. A comparison of massively parallel nucleotide sequencing with oligonucleotide microarrays for global transcription profiling.
    Bradford JR, Hey Y, Yates T, Li Y, Pepper SD, Miller CJ.
    BMC Genomics; 2010 May 05; 11():282. PubMed ID: 20444259
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  • 2. A systematic comparison and evaluation of high density exon arrays and RNA-seq technology used to unravel the peripheral blood transcriptome of sickle cell disease.
    Raghavachari N, Barb J, Yang Y, Liu P, Woodhouse K, Levy D, O'Donnell CJ, Munson PJ, Kato GJ.
    BMC Med Genomics; 2012 Jun 29; 5():28. PubMed ID: 22747986
    [Abstract] [Full Text] [Related]

  • 3. Gene expression and isoform variation analysis using Affymetrix Exon Arrays.
    Bemmo A, Benovoy D, Kwan T, Gaffney DJ, Jensen RV, Majewski J.
    BMC Genomics; 2008 Nov 07; 9():529. PubMed ID: 18990248
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  • 4. A comparison of RNA-seq and exon arrays for whole genome transcription profiling of the L5 spinal nerve transection model of neuropathic pain in the rat.
    Perkins JR, Antunes-Martins A, Calvo M, Grist J, Rust W, Schmid R, Hildebrandt T, Kohl M, Orengo C, McMahon SB, Bennett DL.
    Mol Pain; 2014 Jan 28; 10():7. PubMed ID: 24472155
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  • 7. Comparative evaluation of isoform-level gene expression estimation algorithms for RNA-seq and exon-array platforms.
    Dapas M, Kandpal M, Bi Y, Davuluri RV.
    Brief Bioinform; 2017 Mar 01; 18(2):260-269. PubMed ID: 26944083
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  • 8. Comparison of RNA-seq and microarray platforms for splice event detection using a cross-platform algorithm.
    Romero JP, Ortiz-Estévez M, Muniategui A, Carrancio S, de Miguel FJ, Carazo F, Montuenga LM, Loos R, Pío R, Trotter MWB, Rubio A.
    BMC Genomics; 2018 Sep 25; 19(1):703. PubMed ID: 30253752
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  • 11. Evaluating gene expression in C57BL/6J and DBA/2J mouse striatum using RNA-Seq and microarrays.
    Bottomly D, Walter NA, Hunter JE, Darakjian P, Kawane S, Buck KJ, Searles RP, Mooney M, McWeeney SK, Hitzemann R.
    PLoS One; 2011 Mar 24; 6(3):e17820. PubMed ID: 21455293
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  • 12. GATExplorer: genomic and transcriptomic explorer; mapping expression probes to gene loci, transcripts, exons and ncRNAs.
    Risueño A, Fontanillo C, Dinger ME, De Las Rivas J.
    BMC Bioinformatics; 2010 Apr 29; 11():221. PubMed ID: 20429936
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  • 13. A large-scale comparative study of isoform expressions measured on four platforms.
    Zhang W, Petegrosso R, Chang JW, Sun J, Yong J, Chien J, Kuang R.
    BMC Genomics; 2020 Mar 30; 21(1):272. PubMed ID: 32228441
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  • 14. Differentially expressed alternatively spliced genes in malignant pleural mesothelioma identified using massively parallel transcriptome sequencing.
    Dong L, Jensen RV, De Rienzo A, Gordon GJ, Xu Y, Sugarbaker DJ, Bueno R.
    BMC Med Genet; 2009 Dec 31; 10():149. PubMed ID: 20043850
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  • 15. BEAT: Bioinformatics Exon Array Tool to store, analyze and visualize Affymetrix GeneChip Human Exon Array data from disease experiments.
    Consiglio A, Carella M, De Caro G, Delle Foglie G, Giovannelli C, Grillo G, Ianigro M, Licciulli F, Palumbo O, Piepoli A, Ranieri E, Liuni S.
    BMC Bioinformatics; 2012 Mar 28; 13 Suppl 4(Suppl 4):S21. PubMed ID: 22536968
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  • 16. FIRMA: a method for detection of alternative splicing from exon array data.
    Purdom E, Simpson KM, Robinson MD, Conboy JG, Lapuk AV, Speed TP.
    Bioinformatics; 2008 Aug 01; 24(15):1707-14. PubMed ID: 18573797
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  • 17. Human transcriptome array for high-throughput clinical studies.
    Xu W, Seok J, Mindrinos MN, Schweitzer AC, Jiang H, Wilhelmy J, Clark TA, Kapur K, Xing Y, Faham M, Storey JD, Moldawer LL, Maier RV, Tompkins RG, Wong WH, Davis RW, Xiao W, Inflammation and Host Response to Injury Large-Scale Collaborative Research Program.
    Proc Natl Acad Sci U S A; 2011 Mar 01; 108(9):3707-12. PubMed ID: 21317363
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  • 18. Overestimation of alternative splicing caused by variable probe characteristics in exon arrays.
    Gaidatzis D, Jacobeit K, Oakeley EJ, Stadler MB.
    Nucleic Acids Res; 2009 Sep 01; 37(16):e107. PubMed ID: 19528075
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  • 19. A comparison of RNA-Seq and high-density exon array for detecting differential gene expression between closely related species.
    Liu S, Lin L, Jiang P, Wang D, Xing Y.
    Nucleic Acids Res; 2011 Jan 01; 39(2):578-88. PubMed ID: 20864445
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  • 20. Implementation of exon arrays: alternative splicing during T-cell proliferation as determined by whole genome analysis.
    Whistler T, Chiang CF, Lonergan W, Hollier M, Unger ER.
    BMC Genomics; 2010 Sep 14; 11():496. PubMed ID: 20840771
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