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Journal Abstract Search

188 related items for PubMed ID: 20525254

  • 1. Development of a novel splice array platform and its application in the identification of alternative splice variants in lung cancer.
    Pio R, Blanco D, Pajares MJ, Aibar E, Durany O, Ezponda T, Agorreta J, Gomez-Roman J, Anton MA, Rubio A, Lozano MD, López-Picazo JM, Subirada F, Maes T, Montuenga LM.
    BMC Genomics; 2010 Jun 03; 11():352. PubMed ID: 20525254
    [Abstract] [Full Text] [Related]

  • 2. Exon array analysis using re-defined probe sets results in reliable identification of alternatively spliced genes in non-small cell lung cancer.
    Langer W, Sohler F, Leder G, Beckmann G, Seidel H, Gröne J, Hummel M, Sommer A.
    BMC Genomics; 2010 Nov 30; 11():676. PubMed ID: 21118496
    [Abstract] [Full Text] [Related]

  • 3. A statistical method for predicting splice variants between two groups of samples using GeneChip expression array data.
    Fan W, Khalid N, Hallahan AR, Olson JM, Zhao LP.
    Theor Biol Med Model; 2006 Apr 07; 3():19. PubMed ID: 16603076
    [Abstract] [Full Text] [Related]

  • 4. Comparison of Affymetrix Gene Array with the Exon Array shows potential application for detection of transcript isoform variation.
    Ha KCh, Coulombe-Huntington J, Majewski J.
    BMC Genomics; 2009 Nov 12; 10():519. PubMed ID: 19909511
    [Abstract] [Full Text] [Related]

  • 5. Optimization of oligonucleotide arrays and RNA amplification protocols for analysis of transcript structure and alternative splicing.
    Castle J, Garrett-Engele P, Armour CD, Duenwald SJ, Loerch PM, Meyer MR, Schadt EE, Stoughton R, Parrish ML, Shoemaker DD, Johnson JM.
    Genome Biol; 2003 Nov 12; 4(10):R66. PubMed ID: 14519201
    [Abstract] [Full Text] [Related]

  • 6. Differentially expressed alternatively spliced genes in malignant pleural mesothelioma identified using massively parallel transcriptome sequencing.
    Dong L, Jensen RV, De Rienzo A, Gordon GJ, Xu Y, Sugarbaker DJ, Bueno R.
    BMC Med Genet; 2009 Dec 31; 10():149. PubMed ID: 20043850
    [Abstract] [Full Text] [Related]

  • 7. Extent and diversity of human alternative splicing established by complementary database annotation and microarray analysis.
    Bingham JL, Carrigan PE, Miller LJ, Srinivasan S.
    OMICS; 2008 Mar 31; 12(1):83-92. PubMed ID: 18266558
    [Abstract] [Full Text] [Related]

  • 8. Inferring global levels of alternative splicing isoforms using a generative model of microarray data.
    Shai O, Morris QD, Blencowe BJ, Frey BJ.
    Bioinformatics; 2006 Mar 01; 22(5):606-13. PubMed ID: 16403798
    [Abstract] [Full Text] [Related]

  • 9. Predicting splice variant from DNA chip expression data.
    Hu GK, Madore SJ, Moldover B, Jatkoe T, Balaban D, Thomas J, Wang Y.
    Genome Res; 2001 Jul 01; 11(7):1237-45. PubMed ID: 11435406
    [Abstract] [Full Text] [Related]

  • 10. A microarray configuration to quantify expression levels and relative abundance of splice variants.
    Fehlbaum P, Guihal C, Bracco L, Cochet O.
    Nucleic Acids Res; 2005 Mar 10; 33(5):e47. PubMed ID: 15760843
    [Abstract] [Full Text] [Related]

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  • 12. Exon array analysis of head and neck cancers identifies a hypoxia related splice variant of LAMA3 associated with a poor prognosis.
    Moller-Levet CS, Betts GN, Harris AL, Homer JJ, West CM, Miller CJ.
    PLoS Comput Biol; 2009 Nov 10; 5(11):e1000571. PubMed ID: 19936049
    [Abstract] [Full Text] [Related]

  • 13. Gene structure-based splice variant deconvolution using a microarray platform.
    Wang H, Hubbell E, Hu JS, Mei G, Cline M, Lu G, Clark T, Siani-Rose MA, Ares M, Kulp DC, Haussler D.
    Bioinformatics; 2003 Nov 10; 19 Suppl 1():i315-22. PubMed ID: 12855476
    [Abstract] [Full Text] [Related]

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  • 15. Read-Split-Run: an improved bioinformatics pipeline for identification of genome-wide non-canonical spliced regions using RNA-Seq data.
    Bai Y, Kinne J, Donham B, Jiang F, Ding L, Hassler JR, Kaufman RJ.
    BMC Genomics; 2016 Aug 22; 17 Suppl 7(Suppl 7):503. PubMed ID: 27556805
    [Abstract] [Full Text] [Related]

  • 16. Alternative splicing and differential gene expression in colon cancer detected by a whole genome exon array.
    Gardina PJ, Clark TA, Shimada B, Staples MK, Yang Q, Veitch J, Schweitzer A, Awad T, Sugnet C, Dee S, Davies C, Williams A, Turpaz Y.
    BMC Genomics; 2006 Dec 27; 7():325. PubMed ID: 17192196
    [Abstract] [Full Text] [Related]

  • 17. MADS+: discovery of differential splicing events from Affymetrix exon junction array data.
    Shen S, Warzecha CC, Carstens RP, Xing Y.
    Bioinformatics; 2010 Jan 15; 26(2):268-9. PubMed ID: 19933160
    [Abstract] [Full Text] [Related]

  • 18. SpliceVista, a tool for splice variant identification and visualization in shotgun proteomics data.
    Zhu Y, Hultin-Rosenberg L, Forshed J, Branca RM, Orre LM, Lehtiö J.
    Mol Cell Proteomics; 2014 Jun 15; 13(6):1552-62. PubMed ID: 24692640
    [Abstract] [Full Text] [Related]

  • 19. Identification of alternative splicing events regulated by the oncogenic factor SRSF1 in lung cancer.
    de Miguel FJ, Sharma RD, Pajares MJ, Montuenga LM, Rubio A, Pio R.
    Cancer Res; 2014 Feb 15; 74(4):1105-15. PubMed ID: 24371231
    [Abstract] [Full Text] [Related]

  • 20. Identification of five mouse mu-opioid receptor (MOR) gene (Oprm1) splice variants containing a newly identified alternatively spliced exon.
    Doyle GA, Sheng XR, Lin SS, Press DM, Grice DE, Buono RJ, Ferraro TN, Berrettini WH.
    Gene; 2007 Jun 15; 395(1-2):98-107. PubMed ID: 17398041
    [Abstract] [Full Text] [Related]

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