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Journal Abstract Search


161 related items for PubMed ID: 20591903

  • 1. MIReNA: finding microRNAs with high accuracy and no learning at genome scale and from deep sequencing data.
    Mathelier A, Carbone A.
    Bioinformatics; 2010 Sep 15; 26(18):2226-34. PubMed ID: 20591903
    [Abstract] [Full Text] [Related]

  • 2. Discovering microRNAs from deep sequencing data using miRDeep.
    Friedländer MR, Chen W, Adamidi C, Maaskola J, Einspanier R, Knespel S, Rajewsky N.
    Nat Biotechnol; 2008 Apr 15; 26(4):407-15. PubMed ID: 18392026
    [Abstract] [Full Text] [Related]

  • 3. De novo SVM classification of precursor microRNAs from genomic pseudo hairpins using global and intrinsic folding measures.
    Ng KL, Mishra SK.
    Bioinformatics; 2007 Jun 01; 23(11):1321-30. PubMed ID: 17267435
    [Abstract] [Full Text] [Related]

  • 4. Computational identification of microRNAs and their targets in Gossypium hirsutum expressed sequence tags.
    Qiu CX, Xie FL, Zhu YY, Guo K, Huang SQ, Nie L, Yang ZM.
    Gene; 2007 Jun 15; 395(1-2):49-61. PubMed ID: 17408884
    [Abstract] [Full Text] [Related]

  • 5. Classification of real and pseudo microRNA precursors using local structure-sequence features and support vector machine.
    Xue C, Li F, He T, Liu GP, Li Y, Zhang X.
    BMC Bioinformatics; 2005 Dec 29; 6():310. PubMed ID: 16381612
    [Abstract] [Full Text] [Related]

  • 6. MicroRNA identification based on sequence and structure alignment.
    Wang X, Zhang J, Li F, Gu J, He T, Zhang X, Li Y.
    Bioinformatics; 2005 Sep 15; 21(18):3610-4. PubMed ID: 15994192
    [Abstract] [Full Text] [Related]

  • 7. Identification of homologous microRNAs in 56 animal genomes.
    Li SC, Chan WC, Hu LY, Lai CH, Hsu CN, Lin WC.
    Genomics; 2010 Jul 15; 96(1):1-9. PubMed ID: 20347954
    [Abstract] [Full Text] [Related]

  • 8. Computational identification of novel microRNAs and targets in Brassica napus.
    Xie FL, Huang SQ, Guo K, Xiang AL, Zhu YY, Nie L, Yang ZM.
    FEBS Lett; 2007 Apr 03; 581(7):1464-74. PubMed ID: 17367786
    [Abstract] [Full Text] [Related]

  • 9. Specificity and sensitivity of PROMIR, ERPIN and MIR-ABELA in predicting pre-microRNAs in the chicken genome.
    Sebastian B, Aggrey SE.
    In Silico Biol; 2008 Apr 03; 8(5-6):377-81. PubMed ID: 19374126
    [Abstract] [Full Text] [Related]

  • 10. Predicting human microRNA precursors based on an optimized feature subset generated by GA-SVM.
    Wang Y, Chen X, Jiang W, Li L, Li W, Yang L, Liao M, Lian B, Lv Y, Wang S, Wang S, Li X.
    Genomics; 2011 Aug 03; 98(2):73-8. PubMed ID: 21586321
    [Abstract] [Full Text] [Related]

  • 11. mirExplorer: detecting microRNAs from genome and next generation sequencing data using the AdaBoost method with transition probability matrix and combined features.
    Guan DG, Liao JY, Qu ZH, Zhang Y, Qu LH.
    RNA Biol; 2011 Aug 03; 8(5):922-34. PubMed ID: 21881406
    [Abstract] [Full Text] [Related]

  • 12. An approach for the identification of microRNA with an application to Anopheles gambiae.
    Chatterjee R, Chaudhuri K.
    Acta Biochim Pol; 2006 Aug 03; 53(2):303-9. PubMed ID: 16770443
    [Abstract] [Full Text] [Related]

  • 13. Exploring cross-species-related miRNAs based on sequence and secondary structure.
    Chen F, Chen YP.
    IEEE Trans Biomed Eng; 2010 Jul 03; 57(7):1547-53. PubMed ID: 20199930
    [Abstract] [Full Text] [Related]

  • 14. New syntax to describe local continuous structure-sequence information for recognizing new pre-miRNAs.
    Wang M, Song X, Han P, Li W, Jiang B.
    J Theor Biol; 2010 May 21; 264(2):578-84. PubMed ID: 20202471
    [Abstract] [Full Text] [Related]

  • 15. Computational identification of novel microRNA homologs in the chimpanzee genome.
    Baev V, Daskalova E, Minkov I.
    Comput Biol Chem; 2009 Feb 21; 33(1):62-70. PubMed ID: 18760970
    [Abstract] [Full Text] [Related]

  • 16. Computational identification of novel family members of microRNA genes in Arabidopsis thaliana and Oryza sativa.
    Li Y, Li W, Jin YX.
    Acta Biochim Biophys Sin (Shanghai); 2005 Feb 21; 37(2):75-87. PubMed ID: 15685364
    [Abstract] [Full Text] [Related]

  • 17. TargetMiner: microRNA target prediction with systematic identification of tissue-specific negative examples.
    Bandyopadhyay S, Mitra R.
    Bioinformatics; 2009 Oct 15; 25(20):2625-31. PubMed ID: 19692556
    [Abstract] [Full Text] [Related]

  • 18. BosFinder: a novel pre-microRNA gene prediction algorithm in Bos taurus.
    Sadeghi B, Ahmadi H, Azimzadeh-Jamalkandi S, Nassiri MR, Masoudi-Nejad A.
    Anim Genet; 2014 Aug 15; 45(4):479-84. PubMed ID: 24835488
    [Abstract] [Full Text] [Related]

  • 19. Genetic algorithm-based efficient feature selection for classification of pre-miRNAs.
    Xuan P, Guo MZ, Wang J, Wang CY, Liu XY, Liu Y.
    Genet Mol Res; 2011 Apr 12; 10(2):588-603. PubMed ID: 21491369
    [Abstract] [Full Text] [Related]

  • 20. Genome-wide computational identification of microRNAs and their targets in the deep-branching eukaryote Giardia lamblia.
    Zhang YQ, Chen DL, Tian HF, Zhang BH, Wen JF.
    Comput Biol Chem; 2009 Oct 12; 33(5):391-6. PubMed ID: 19716768
    [Abstract] [Full Text] [Related]


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