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Journal Abstract Search

163 related items for PubMed ID: 20862292

  • 21. Dissecting an alternative splicing analysis workflow for GeneChip Exon 1.0 ST Affymetrix arrays.
    Della Beffa C, Cordero F, Calogero RA.
    BMC Genomics; 2008 Nov 28; 9():571. PubMed ID: 19040723
    [Abstract] [Full Text] [Related]

  • 22. Using genomic DNA-based probe-selection to improve the sensitivity of high-density oligonucleotide arrays when applied to heterologous species.
    Hammond JP, Broadley MR, Craigon DJ, Higgins J, Emmerson ZF, Townsend HJ, White PJ, May ST.
    Plant Methods; 2005 Nov 09; 1(1):10. PubMed ID: 16280083
    [Abstract] [Full Text] [Related]

  • 23. Comprehensive survey of SNPs in the Affymetrix exon array using the 1000 Genomes dataset.
    Gamazon ER, Zhang W, Dolan ME, Cox NJ.
    PLoS One; 2010 Feb 23; 5(2):e9366. PubMed ID: 20186275
    [Abstract] [Full Text] [Related]

  • 24. Detection of TMPRSS2-ERG translocations in human prostate cancer by expression profiling using GeneChip Human Exon 1.0 ST arrays.
    Jhavar S, Reid A, Clark J, Kote-Jarai Z, Christmas T, Thompson A, Woodhouse C, Ogden C, Fisher C, Corbishley C, De-Bono J, Eeles R, Brewer D, Cooper C.
    J Mol Diagn; 2008 Jan 23; 10(1):50-7. PubMed ID: 18165275
    [Abstract] [Full Text] [Related]

  • 25. Expression profiling using affymetrix genechip probe arrays.
    Schinke-Braun M, Couget JA.
    Methods Mol Biol; 2007 Jan 23; 366():13-40. PubMed ID: 17568117
    [Abstract] [Full Text] [Related]

  • 26. A systematic comparison and evaluation of high density exon arrays and RNA-seq technology used to unravel the peripheral blood transcriptome of sickle cell disease.
    Raghavachari N, Barb J, Yang Y, Liu P, Woodhouse K, Levy D, O'Donnell CJ, Munson PJ, Kato GJ.
    BMC Med Genomics; 2012 Jun 29; 5():28. PubMed ID: 22747986
    [Abstract] [Full Text] [Related]

  • 27. Implementation of exon arrays: alternative splicing during T-cell proliferation as determined by whole genome analysis.
    Whistler T, Chiang CF, Lonergan W, Hollier M, Unger ER.
    BMC Genomics; 2010 Sep 14; 11():496. PubMed ID: 20840771
    [Abstract] [Full Text] [Related]

  • 28. Exon array data analysis using Affymetrix power tools and R statistical software.
    Lockstone HE.
    Brief Bioinform; 2011 Nov 14; 12(6):634-44. PubMed ID: 21498550
    [Abstract] [Full Text] [Related]

  • 29. Framework for reanalysis of publicly available Affymetrix® GeneChip® data sets based on functional regions of interest.
    Saka E, Harrison BJ, West K, Petruska JC, Rouchka EC.
    BMC Genomics; 2017 Dec 06; 18(Suppl 10):875. PubMed ID: 29244006
    [Abstract] [Full Text] [Related]

  • 30. Cross-hybridization modeling on Affymetrix exon arrays.
    Kapur K, Jiang H, Xing Y, Wong WH.
    Bioinformatics; 2008 Dec 15; 24(24):2887-93. PubMed ID: 18984598
    [Abstract] [Full Text] [Related]

  • 31. Using high-density exon arrays to profile gene expression in closely related species.
    Lin L, Liu S, Brockway H, Seok J, Jiang P, Wong WH, Xing Y.
    Nucleic Acids Res; 2009 Jul 15; 37(12):e90. PubMed ID: 19474342
    [Abstract] [Full Text] [Related]

  • 32. SNPinProbe_1.0: a database for filtering out probes in the Affymetrix GeneChip human exon 1.0 ST array potentially affected by SNPs.
    Duan S, Zhang W, Bleibel WK, Cox NJ, Dolan ME.
    Bioinformation; 2008 Aug 01; 2(10):469-70. PubMed ID: 18841244
    [Abstract] [Full Text] [Related]

  • 33. A simple optimization can improve the performance of single feature polymorphism detection by Affymetrix expression arrays.
    Horiuchi Y, Harushima Y, Fujisawa H, Mochizuki T, Kawakita M, Sakaguchi T, Kurata N.
    BMC Genomics; 2010 May 20; 11():315. PubMed ID: 20482895
    [Abstract] [Full Text] [Related]

  • 34. Optimising the analysis of transcript data using high density oligonucleotide arrays and genomic DNA-based probe selection.
    Graham NS, Broadley MR, Hammond JP, White PJ, May ST.
    BMC Genomics; 2007 Oct 01; 8():344. PubMed ID: 17908303
    [Abstract] [Full Text] [Related]

  • 35. Exon Array Analyzer: a web interface for Affymetrix exon array analysis.
    Gellert P, Uchida S, Braun T.
    Bioinformatics; 2009 Dec 15; 25(24):3323-4. PubMed ID: 19808879
    [Abstract] [Full Text] [Related]

  • 36. easyExon--a Java-based GUI tool for processing and visualization of Affymetrix exon array data.
    Chang TY, Li YY, Jen CH, Yang TP, Lin CH, Hsu MT, Wang HW.
    BMC Bioinformatics; 2008 Oct 14; 9():432. PubMed ID: 18851762
    [Abstract] [Full Text] [Related]

  • 37. MADS+: discovery of differential splicing events from Affymetrix exon junction array data.
    Shen S, Warzecha CC, Carstens RP, Xing Y.
    Bioinformatics; 2010 Jan 15; 26(2):268-9. PubMed ID: 19933160
    [Abstract] [Full Text] [Related]

  • 38. Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data.
    Dai M, Wang P, Boyd AD, Kostov G, Athey B, Jones EG, Bunney WE, Myers RM, Speed TP, Akil H, Watson SJ, Meng F.
    Nucleic Acids Res; 2005 Nov 10; 33(20):e175. PubMed ID: 16284200
    [Abstract] [Full Text] [Related]

  • 39. Large-scale analysis of antisense transcription in wheat using the Affymetrix GeneChip Wheat Genome Array.
    Coram TE, Settles ML, Chen X.
    BMC Genomics; 2009 May 29; 10():253. PubMed ID: 19480707
    [Abstract] [Full Text] [Related]

  • 40. Genome-wide identification and testing of superior reference genes for transcript normalization in Arabidopsis.
    Czechowski T, Stitt M, Altmann T, Udvardi MK, Scheible WR.
    Plant Physiol; 2005 Sep 29; 139(1):5-17. PubMed ID: 16166256
    [Abstract] [Full Text] [Related]

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