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Journal Abstract Search

211 related items for PubMed ID: 21121019

  • 1. Identification of functional modules in a PPI network by bounded diameter clustering.
    Sohaee N, Forst CV.
    J Bioinform Comput Biol; 2010 Dec; 8(6):929-43. PubMed ID: 21121019
    [Abstract] [Full Text] [Related]

  • 2. Identification of functional modules in a PPI network by clique percolation clustering.
    Zhang S, Ning X, Zhang XS.
    Comput Biol Chem; 2006 Dec; 30(6):445-51. PubMed ID: 17098476
    [Abstract] [Full Text] [Related]

  • 3. A degree-distribution based hierarchical agglomerative clustering algorithm for protein complexes identification.
    Yu L, Gao L, Li K, Zhao Y, Chiu DK.
    Comput Biol Chem; 2011 Oct 12; 35(5):298-307. PubMed ID: 22000801
    [Abstract] [Full Text] [Related]

  • 4. A hybrid clustering algorithm for identifying modules in Protein-Protein Interaction networks.
    Yu L, Gao L, Sun PG.
    Int J Data Min Bioinform; 2010 Oct 12; 4(5):600-15. PubMed ID: 21133044
    [Abstract] [Full Text] [Related]

  • 5. Efficient and accurate Greedy Search Methods for mining functional modules in protein interaction networks.
    He J, Li C, Ye B, Zhong W.
    BMC Bioinformatics; 2012 Jun 25; 13 Suppl 10(Suppl 10):S19. PubMed ID: 22759424
    [Abstract] [Full Text] [Related]

  • 6. An automated method for finding molecular complexes in large protein interaction networks.
    Bader GD, Hogue CW.
    BMC Bioinformatics; 2003 Jan 13; 4():2. PubMed ID: 12525261
    [Abstract] [Full Text] [Related]

  • 7. Evaluation of clustering algorithms for protein-protein interaction networks.
    Brohée S, van Helden J.
    BMC Bioinformatics; 2006 Nov 06; 7():488. PubMed ID: 17087821
    [Abstract] [Full Text] [Related]

  • 8. ModuleSearch: finding functional modules in a protein-protein interaction network.
    Cui G, Shrestha R, Han K.
    Comput Methods Biomech Biomed Engin; 2012 Nov 06; 15(7):691-9. PubMed ID: 21827286
    [Abstract] [Full Text] [Related]

  • 9. Evolutionary Graph Clustering for Protein Complex Identification.
    He T, Chan KCC.
    IEEE/ACM Trans Comput Biol Bioinform; 2018 Nov 06; 15(3):892-904. PubMed ID: 28029628
    [Abstract] [Full Text] [Related]

  • 10. C-element: a new clustering algorithm to find high quality functional modules in PPI networks.
    Ghasemi M, Rahgozar M, Bidkhori G, Masoudi-Nejad A.
    PLoS One; 2013 Nov 06; 8(9):e72366. PubMed ID: 24039752
    [Abstract] [Full Text] [Related]

  • 11. Markov clustering versus affinity propagation for the partitioning of protein interaction graphs.
    Vlasblom J, Wodak SJ.
    BMC Bioinformatics; 2009 Mar 30; 10():99. PubMed ID: 19331680
    [Abstract] [Full Text] [Related]

  • 12. Predicting overlapping protein complexes from weighted protein interaction graphs by gradually expanding dense neighborhoods.
    Dimitrakopoulos C, Theofilatos K, Pegkas A, Likothanassis S, Mavroudi S.
    Artif Intell Med; 2016 Jul 30; 71():62-9. PubMed ID: 27506132
    [Abstract] [Full Text] [Related]

  • 13. Combining functional and topological properties to identify core modules in protein interaction networks.
    Lubovac Z, Gamalielsson J, Olsson B.
    Proteins; 2006 Sep 01; 64(4):948-59. PubMed ID: 16794996
    [Abstract] [Full Text] [Related]

  • 14. Growing functional modules from a seed protein via integration of protein interaction and gene expression data.
    Maraziotis IA, Dimitrakopoulou K, Bezerianos A.
    BMC Bioinformatics; 2007 Oct 23; 8():408. PubMed ID: 17956603
    [Abstract] [Full Text] [Related]

  • 15. From Function to Interaction: A New Paradigm for Accurately Predicting Protein Complexes Based on Protein-to-Protein Interaction Networks.
    Xu B, Guan J.
    IEEE/ACM Trans Comput Biol Bioinform; 2014 Oct 23; 11(4):616-27. PubMed ID: 26356332
    [Abstract] [Full Text] [Related]

  • 16. A multi-network clustering method for detecting protein complexes from multiple heterogeneous networks.
    Ou-Yang L, Yan H, Zhang XF.
    BMC Bioinformatics; 2017 Dec 01; 18(Suppl 13):463. PubMed ID: 29219066
    [Abstract] [Full Text] [Related]

  • 17. Learning the structure of protein-protein interaction networks.
    Kuchaiev O, Przulj N.
    Pac Symp Biocomput; 2009 Dec 01; ():39-50. PubMed ID: 19209694
    [Abstract] [Full Text] [Related]

  • 18. Protein complex prediction via cost-based clustering.
    King AD, Przulj N, Jurisica I.
    Bioinformatics; 2004 Nov 22; 20(17):3013-20. PubMed ID: 15180928
    [Abstract] [Full Text] [Related]

  • 19. NCMine: Core-peripheral based functional module detection using near-clique mining.
    Tadaka S, Kinoshita K.
    Bioinformatics; 2016 Nov 15; 32(22):3454-3460. PubMed ID: 27466623
    [Abstract] [Full Text] [Related]

  • 20. Towards the identification of protein complexes and functional modules by integrating PPI network and gene expression data.
    Li M, Wu X, Wang J, Pan Y.
    BMC Bioinformatics; 2012 May 23; 13():109. PubMed ID: 22621308
    [Abstract] [Full Text] [Related]

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