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Journal Abstract Search


365 related items for PubMed ID: 21487594

  • 1. Effects of all-atom force fields on amyloid oligomerization: replica exchange molecular dynamics simulations of the Aβ(16-22) dimer and trimer.
    Nguyen PH, Li MS, Derreumaux P.
    Phys Chem Chem Phys; 2011 May 28; 13(20):9778-88. PubMed ID: 21487594
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  • 2. Amyloid beta-peptide oligomerization in silico: dimer and trimer.
    Jang S, Shin S.
    J Phys Chem B; 2006 Feb 09; 110(5):1955-8. PubMed ID: 16471767
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  • 3. Effects of G33A and G33I mutations on the structures of monomer and dimer of the amyloid-β fragment 29-42 by replica exchange molecular dynamics simulations.
    Lu Y, Wei G, Derreumaux P.
    J Phys Chem B; 2011 Feb 10; 115(5):1282-8. PubMed ID: 21186801
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  • 5. Effects of force fields on the conformational and dynamic properties of amyloid β(1-40) dimer explored by replica exchange molecular dynamics simulations.
    Watts CR, Gregory A, Frisbie C, Lovas S.
    Proteins; 2018 Mar 10; 86(3):279-300. PubMed ID: 29235155
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  • 6. Amyloid peptide Aβ40 inhibits aggregation of Aβ42: evidence from molecular dynamics simulations.
    Viet MH, Li MS.
    J Chem Phys; 2012 Jun 28; 136(24):245105. PubMed ID: 22755606
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  • 7. Structures and thermodynamics of Alzheimer's amyloid-beta Abeta(16-35) monomer and dimer by replica exchange molecular dynamics simulations: implication for full-length Abeta fibrillation.
    Chebaro Y, Mousseau N, Derreumaux P.
    J Phys Chem B; 2009 May 28; 113(21):7668-75. PubMed ID: 19415895
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  • 9. Dimerization process of amyloid-β(29-42) studied by the Hamiltonian replica-permutation molecular dynamics simulations.
    Itoh SG, Okumura H.
    J Phys Chem B; 2014 Oct 02; 118(39):11428-36. PubMed ID: 25192386
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  • 10. Molecular dynamics simulations of Aβ fibril interactions with β-sheet breaker peptides.
    Bruce NJ, Chen D, Dastidar SG, Marks GE, Schein CH, Bryce RA.
    Peptides; 2010 Nov 02; 31(11):2100-8. PubMed ID: 20691234
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  • 11. Molecular dynamics simulations of low-ordered alzheimer β-amyloid oligomers from dimer to hexamer on self-assembled monolayers.
    Zhao J, Wang Q, Liang G, Zheng J.
    Langmuir; 2011 Dec 20; 27(24):14876-87. PubMed ID: 22077332
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  • 12. Conformational ensemble and polymorphism of the all-atom Alzheimer's Aβ(37-42) amyloid peptide oligomers.
    Nguyen PH, Derreumaux P.
    J Phys Chem B; 2013 May 16; 117(19):5831-40. PubMed ID: 23581814
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  • 13. A comparative study of two different force fields on structural and thermodynamics character of H1 peptide via molecular dynamics simulations.
    Cao Z, Wang J.
    J Biomol Struct Dyn; 2010 Apr 16; 27(5):651-61. PubMed ID: 20085382
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  • 15. Energy landscapes of the monomer and dimer of the Alzheimer's peptide Abeta(1-28).
    Dong X, Chen W, Mousseau N, Derreumaux P.
    J Chem Phys; 2008 Mar 28; 128(12):125108. PubMed ID: 18376983
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  • 16. Structural properties of amyloid β(1-40) dimer explored by replica exchange molecular dynamics simulations.
    Watts CR, Gregory AJ, Frisbie CP, Lovas S.
    Proteins; 2017 Jun 28; 85(6):1024-1045. PubMed ID: 28241387
    [Abstract] [Full Text] [Related]

  • 17. Effects of All-Atom Molecular Mechanics Force Fields on Amyloid Peptide Assembly: The Case of Aβ16-22 Dimer.
    Man VH, He X, Derreumaux P, Ji B, Xie XQ, Nguyen PH, Wang J.
    J Chem Theory Comput; 2019 Feb 12; 15(2):1440-1452. PubMed ID: 30633867
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  • 20. Probing the initial stage of aggregation of the Abeta(10-35)-protein: assessing the propensity for peptide dimerization.
    Tarus B, Straub JE, Thirumalai D.
    J Mol Biol; 2005 Feb 04; 345(5):1141-56. PubMed ID: 15644211
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