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Journal Abstract Search

438 related items for PubMed ID: 21605354

  • 1. GPCR-SSFE: a comprehensive database of G-protein-coupled receptor template predictions and homology models.
    Worth CL, Kreuchwig A, Kleinau G, Krause G.
    BMC Bioinformatics; 2011 May 23; 12():185. PubMed ID: 21605354
    [Abstract] [Full Text] [Related]

  • 2. GPCR-SSFE 2.0-a fragment-based molecular modeling web tool for Class A G-protein coupled receptors.
    Worth CL, Kreuchwig F, Tiemann JKS, Kreuchwig A, Ritschel M, Kleinau G, Hildebrand PW, Krause G.
    Nucleic Acids Res; 2017 Jul 03; 45(W1):W408-W415. PubMed ID: 28582569
    [Abstract] [Full Text] [Related]

  • 3. Comparative sequence and structural analyses of G-protein-coupled receptor crystal structures and implications for molecular models.
    Worth CL, Kleinau G, Krause G.
    PLoS One; 2009 Sep 16; 4(9):e7011. PubMed ID: 19756152
    [Abstract] [Full Text] [Related]

  • 4. Structure modeling of all identified G protein-coupled receptors in the human genome.
    Zhang Y, Devries ME, Skolnick J.
    PLoS Comput Biol; 2006 Feb 16; 2(2):e13. PubMed ID: 16485037
    [Abstract] [Full Text] [Related]

  • 5. X-ray structure breakthroughs in the GPCR transmembrane region.
    Topiol S, Sabio M.
    Biochem Pharmacol; 2009 Jul 01; 78(1):11-20. PubMed ID: 19447219
    [Abstract] [Full Text] [Related]

  • 6. Homology modeling of G-protein-coupled receptors and implications in drug design.
    Patny A, Desai PV, Avery MA.
    Curr Med Chem; 2006 Jul 01; 13(14):1667-91. PubMed ID: 16787212
    [Abstract] [Full Text] [Related]

  • 7. GPCR-MPredictor: multi-level prediction of G protein-coupled receptors using genetic ensemble.
    Naveed M, Khan A.
    Amino Acids; 2012 May 01; 42(5):1809-23. PubMed ID: 21505826
    [Abstract] [Full Text] [Related]

  • 8. 7TM Domain Structure of Adhesion GPCRs.
    de Graaf C, Nijmeijer S, Wolf S, Ernst OP.
    Handb Exp Pharmacol; 2016 May 01; 234():43-66. PubMed ID: 27832483
    [Abstract] [Full Text] [Related]

  • 9. Structure-Based Sequence Alignment of the Transmembrane Domains of All Human GPCRs: Phylogenetic, Structural and Functional Implications.
    Cvicek V, Goddard WA, Abrol R.
    PLoS Comput Biol; 2016 Mar 01; 12(3):e1004805. PubMed ID: 27028541
    [Abstract] [Full Text] [Related]

  • 10. Assessing GPCR homology models constructed from templates of various transmembrane sequence identities: Binding mode prediction and docking enrichment.
    Loo JSE, Emtage AL, Ng KW, Yong ASJ, Doughty SW.
    J Mol Graph Model; 2018 Mar 01; 80():38-47. PubMed ID: 29306746
    [Abstract] [Full Text] [Related]

  • 11. GPCR-PEnDB: a database of protein sequences and derived features to facilitate prediction and classification of G protein-coupled receptors.
    Begum K, Mohl JE, Ayivor F, Perez EE, Leung MY.
    Database (Oxford); 2020 Nov 20; 2020():. PubMed ID: 33216895
    [Abstract] [Full Text] [Related]

  • 12. Modern homology modeling of G-protein coupled receptors: which structural template to use?
    Mobarec JC, Sanchez R, Filizola M.
    J Med Chem; 2009 Aug 27; 52(16):5207-16. PubMed ID: 19627087
    [Abstract] [Full Text] [Related]

  • 13. Homology modeling of a Class A GPCR in the inactive conformation: A quantitative analysis of the correlation between model/template sequence identity and model accuracy.
    Costanzi S, Skorski M, Deplano A, Habermehl B, Mendoza M, Wang K, Biederman M, Dawson J, Gao J.
    J Mol Graph Model; 2016 Nov 27; 70():140-152. PubMed ID: 27723562
    [Abstract] [Full Text] [Related]

  • 14. Performance of virtual screening against GPCR homology models: Impact of template selection and treatment of binding site plasticity.
    Jaiteh M, Rodríguez-Espigares I, Selent J, Carlsson J.
    PLoS Comput Biol; 2020 Mar 27; 16(3):e1007680. PubMed ID: 32168319
    [Abstract] [Full Text] [Related]

  • 15. GGIP: Structure and sequence-based GPCR-GPCR interaction pair predictor.
    Nemoto W, Yamanishi Y, Limviphuvadh V, Saito A, Toh H.
    Proteins; 2016 Sep 27; 84(9):1224-33. PubMed ID: 27191053
    [Abstract] [Full Text] [Related]

  • 16. Template selection and refinement considerations for modelling aminergic GPCR-ligand complexes.
    Urmi KF, Finch AM, Griffith R.
    J Mol Graph Model; 2017 Sep 27; 76():488-503. PubMed ID: 28818718
    [Abstract] [Full Text] [Related]

  • 17. Efficiency of Homology Modeling Assisted Molecular Docking in G-protein Coupled Receptors.
    Bhunia SS, Saxena AK.
    Curr Top Med Chem; 2021 Sep 27; 21(4):269-294. PubMed ID: 32901584
    [Abstract] [Full Text] [Related]

  • 18. A method for the prediction of GPCRs coupling specificity to G-proteins using refined profile Hidden Markov Models.
    Sgourakis NG, Bagos PG, Papasaikas PK, Hamodrakas SJ.
    BMC Bioinformatics; 2005 Apr 22; 6():104. PubMed ID: 15847681
    [Abstract] [Full Text] [Related]

  • 19. Towards improved quality of GPCR models by usage of multiple templates and profile-profile comparison.
    Latek D, Pasznik P, Carlomagno T, Filipek S.
    PLoS One; 2013 Apr 22; 8(2):e56742. PubMed ID: 23468878
    [Abstract] [Full Text] [Related]

  • 20. Quantification of structural distortions in the transmembrane helices of GPCRs.
    Deupi X.
    Methods Mol Biol; 2012 Apr 22; 914():219-35. PubMed ID: 22976031
    [Abstract] [Full Text] [Related]

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