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Journal Abstract Search

122 related items for PubMed ID: 21735129

  • 1. Conformational preferences of modified nucleoside N(2)-methylguanosine (m(2)G) and its derivative N(2), N(2)-dimethylguanosine (m(2)(2)G) occur at 26th position (hinge region) in tRNA.
    Bavi RS, Kamble AD, Kumbhar NM, Kumbhar BV, Sonawane KD.
    Cell Biochem Biophys; 2011 Dec; 61(3):507-21. PubMed ID: 21735129
    [Abstract] [Full Text] [Related]

  • 2. Conformational preferences of modified nucleoside N(4)-acetylcytidine, ac4C occur at "wobble" 34th position in the anticodon loop of tRNA.
    Kumbhar BV, Kamble AD, Sonawane KD.
    Cell Biochem Biophys; 2013 Jul; 66(3):797-816. PubMed ID: 23408308
    [Abstract] [Full Text] [Related]

  • 3. Iso-energetic multiple conformations of hypermodified nucleic acid base wybutine (yW) which occur at 37(th) position in anticodon loop of tRNA(Phe).
    Kumbhar NM, Sonawane KD.
    J Mol Graph Model; 2011 Jun; 29(7):935-46. PubMed ID: 21530341
    [Abstract] [Full Text] [Related]

  • 4. Conformational preferences of hypermodified nucleoside lysidine (k2C) occurring at "wobble" position in anticodon loop of tRNA(Ile).
    Sonawane KD, Tewari R.
    Nucleosides Nucleotides Nucleic Acids; 2008 Oct; 27(10):1158-74. PubMed ID: 18788046
    [Abstract] [Full Text] [Related]

  • 5. Conformational preferences of anticodon 3'-adjacent hypermodified nucleic acid base cis-or trans-zeatin and its 2-methylthio derivative, cis-or trans- ms(2)zeatin.
    Sonawane KD, Sonavane UB, Tewari R.
    J Biomol Struct Dyn; 2002 Feb; 19(4):637-48. PubMed ID: 11843625
    [Abstract] [Full Text] [Related]

  • 6. Comparative Structural Dynamics of tRNA(Phe) with Respect to Hinge Region Methylated Guanosine: A Computational Approach.
    Sonawane KD, Bavi RS, Sambhare SB, Fandilolu PM.
    Cell Biochem Biophys; 2016 Jun; 74(2):157-73. PubMed ID: 27216172
    [Abstract] [Full Text] [Related]

  • 7. Conformational preferences of the base substituent in hypermodified nucleotide queuosine 5'-monophosphate 'pQ' and protonated variant 'pQH+'.
    Sonavane UB, Sonawane KD, Tewari R.
    J Biomol Struct Dyn; 2002 Dec; 20(3):473-85. PubMed ID: 12437386
    [Abstract] [Full Text] [Related]

  • 8. Structural significance of hypermodified nucleic acid base hydroxywybutine (OHyW) which occur at 37th position in the anticodon loop of yeast tRNA(Phe).
    Kumbhar NM, Kumbhar BV, Sonawane KD.
    J Mol Graph Model; 2012 Sep; 38():174-85. PubMed ID: 23073221
    [Abstract] [Full Text] [Related]

  • 9. Identity elements required for enzymatic formation of N2,N2-dimethylguanosine from N2-monomethylated derivative and its possible role in avoiding alternative conformations in archaeal tRNA.
    Urbonavicius J, Armengaud J, Grosjean H.
    J Mol Biol; 2006 Mar 24; 357(2):387-99. PubMed ID: 16434050
    [Abstract] [Full Text] [Related]

  • 10. Conformational preferences of modified nucleic acid bases N6-methyl-N6-(N-threonylcarbonyl) adenine and 2-methylthio-N6-(N-threonylcarbonyl) adenine by the quantum chemical PCILO calculations.
    Tewari R.
    J Biomol Struct Dyn; 1990 Dec 24; 8(3):675-86. PubMed ID: 2129236
    [Abstract] [Full Text] [Related]

  • 11. MD simulation studies to investigate iso-energetic conformational behaviour of modified nucleosides m(2)G and m(2) 2G present in tRNA.
    Bavi RS, Sambhare SB, Sonawane KD.
    Comput Struct Biotechnol J; 2013 Dec 24; 5():e201302015. PubMed ID: 24688708
    [Abstract] [Full Text] [Related]

  • 12. A correlation between N2-dimethylguanosine presence and alternate tRNA conformers.
    Steinberg S, Cedergren R.
    RNA; 1995 Nov 24; 1(9):886-91. PubMed ID: 8548653
    [Abstract] [Full Text] [Related]

  • 13. Nuclear magnetic resonance spectroscopy and molecular modeling reveal that different hydrogen bonding patterns are possible for G.U pairs: one hydrogen bond for each G.U pair in r(GGCGUGCC)(2) and two for each G.U pair in r(GAGUGCUC)(2).
    Chen X, McDowell JA, Kierzek R, Krugh TR, Turner DH.
    Biochemistry; 2000 Aug 01; 39(30):8970-82. PubMed ID: 10913310
    [Abstract] [Full Text] [Related]

  • 14. 1,2-Dibromoethyl-trichlorosilane (CH2BrCHBrSiCl3): conformational structure and vibrational properties by gas-phase electron diffraction, infrared and Raman spectroscopy, and ab initio molecular orbital and density functional theory calculations.
    Johansen TH, Hassler K, Richardson AD, Tekautz G, Hagen K.
    Spectrochim Acta A Mol Biomol Spectrosc; 2005 May 01; 61(7):1307-19. PubMed ID: 15820864
    [Abstract] [Full Text] [Related]

  • 15. Chromophore/DNA interactions: femto- to nanosecond spectroscopy, NMR structure, and electron transfer theory.
    von Feilitzsch T, Tuma J, Neubauer H, Verdier L, Haselsberger R, Feick R, Gurzadyan G, Voityuk AA, Griesinger C, Michel-Beyerle ME.
    J Phys Chem B; 2008 Jan 24; 112(3):973-89. PubMed ID: 18163608
    [Abstract] [Full Text] [Related]

  • 16. Influence of transfer RNA tertiary structure on aminoacylation efficiency by glutaminyl and cysteinyl-tRNA synthetases.
    Sherlin LD, Bullock TL, Newberry KJ, Lipman RS, Hou YM, Beijer B, Sproat BS, Perona JJ.
    J Mol Biol; 2000 Jun 02; 299(2):431-46. PubMed ID: 10860750
    [Abstract] [Full Text] [Related]

  • 17. Geometrical and electronic structure variability of the sugar-phosphate backbone in nucleic acids.
    Svozil D, Sponer JE, Marchan I, Pérez A, Cheatham TE, Forti F, Luque FJ, Orozco M, Sponer J.
    J Phys Chem B; 2008 Jul 10; 112(27):8188-97. PubMed ID: 18558755
    [Abstract] [Full Text] [Related]

  • 18. Conformational stability, the spectroscopic (FT-IR and UV), first order hyperpolarizability, NBO analysis, HOMO and LUMO analysis of 6,8-diphenylimidazo[1,2-α]pyrazine molecule by ab initio HF and density functional methods.
    Sıdır İ, Sıdır YG, Kayagil İ.
    Spectrochim Acta A Mol Biomol Spectrosc; 2011 Oct 15; 81(1):339-52. PubMed ID: 21782498
    [Abstract] [Full Text] [Related]

  • 19. Enzymatic formation of N2,N2-dimethylguanosine in eukaryotic tRNA: importance of the tRNA architecture.
    Edqvist J, Stråby KB, Grosjean H.
    Biochimie; 1995 Oct 15; 77(1-2):54-61. PubMed ID: 7599276
    [Abstract] [Full Text] [Related]

  • 20. Flexibility of "polyunsaturated fatty acid chains" and peptide backbones: A comparative ab initio study.
    Law JM, Setiadi DH, Chass GA, Csizmadia IG, Viskolcz B.
    J Phys Chem A; 2005 Jan 27; 109(3):520-33. PubMed ID: 16833374
    [Abstract] [Full Text] [Related]

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