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459 related items for PubMed ID: 21811420

  • 1. SHH1, a homeodomain protein required for DNA methylation, as well as RDR2, RDM4, and chromatin remodeling factors, associate with RNA polymerase IV.
    Law JA, Vashisht AA, Wohlschlegel JA, Jacobsen SE.
    PLoS Genet; 2011 Jul; 7(7):e1002195. PubMed ID: 21811420
    [Abstract] [Full Text] [Related]

  • 2. Polymerase IV occupancy at RNA-directed DNA methylation sites requires SHH1.
    Law JA, Du J, Hale CJ, Feng S, Krajewski K, Palanca AM, Strahl BD, Patel DJ, Jacobsen SE.
    Nature; 2013 Jun 20; 498(7454):385-9. PubMed ID: 23636332
    [Abstract] [Full Text] [Related]

  • 3. DTF1 is a core component of RNA-directed DNA methylation and may assist in the recruitment of Pol IV.
    Zhang H, Ma ZY, Zeng L, Tanaka K, Zhang CJ, Ma J, Bai G, Wang P, Zhang SW, Liu ZW, Cai T, Tang K, Liu R, Shi X, He XJ, Zhu JK.
    Proc Natl Acad Sci U S A; 2013 May 14; 110(20):8290-5. PubMed ID: 23637343
    [Abstract] [Full Text] [Related]

  • 4. The Pol IV largest subunit CTD quantitatively affects siRNA levels guiding RNA-directed DNA methylation.
    Wendte JM, Haag JR, Pontes OM, Singh J, Metcalf S, Pikaard CS.
    Nucleic Acids Res; 2019 Sep 26; 47(17):9024-9036. PubMed ID: 31329950
    [Abstract] [Full Text] [Related]

  • 5. NRPD4, a protein related to the RPB4 subunit of RNA polymerase II, is a component of RNA polymerases IV and V and is required for RNA-directed DNA methylation.
    He XJ, Hsu YF, Pontes O, Zhu J, Lu J, Bressan RA, Pikaard C, Wang CS, Zhu JK.
    Genes Dev; 2009 Feb 01; 23(3):318-30. PubMed ID: 19204117
    [Abstract] [Full Text] [Related]

  • 6. The initiation of epigenetic silencing of active transposable elements is triggered by RDR6 and 21-22 nucleotide small interfering RNAs.
    Nuthikattu S, McCue AD, Panda K, Fultz D, DeFraia C, Thomas EN, Slotkin RK.
    Plant Physiol; 2013 May 01; 162(1):116-31. PubMed ID: 23542151
    [Abstract] [Full Text] [Related]

  • 7. The RNA silencing enzyme RNA polymerase v is required for plant immunity.
    López A, Ramírez V, García-Andrade J, Flors V, Vera P.
    PLoS Genet; 2011 Dec 01; 7(12):e1002434. PubMed ID: 22242006
    [Abstract] [Full Text] [Related]

  • 8. AGO4 is specifically required for heterochromatic siRNA accumulation at Pol V-dependent loci in Arabidopsis thaliana.
    Wang F, Axtell MJ.
    Plant J; 2017 Apr 01; 90(1):37-47. PubMed ID: 28002617
    [Abstract] [Full Text] [Related]

  • 9. In vitro transcription activities of Pol IV, Pol V, and RDR2 reveal coupling of Pol IV and RDR2 for dsRNA synthesis in plant RNA silencing.
    Haag JR, Ream TS, Marasco M, Nicora CD, Norbeck AD, Pasa-Tolic L, Pikaard CS.
    Mol Cell; 2012 Dec 14; 48(5):811-8. PubMed ID: 23142082
    [Abstract] [Full Text] [Related]

  • 10. RNA polymerase V functions in Arabidopsis interphase heterochromatin organization independently of the 24-nt siRNA-directed DNA methylation pathway.
    Pontes O, Costa-Nunes P, Vithayathil P, Pikaard CS.
    Mol Plant; 2009 Jul 14; 2(4):700-710. PubMed ID: 19825650
    [Abstract] [Full Text] [Related]

  • 11. The NRPD1 N-terminus contains a Pol IV-specific motif that is critical for genome surveillance in Arabidopsis.
    Ferrafiat L, Pflieger D, Singh J, Thieme M, Böhrer M, Himber C, Gerbaud A, Bucher E, Pikaard CS, Blevins T.
    Nucleic Acids Res; 2019 Sep 26; 47(17):9037-9052. PubMed ID: 31372633
    [Abstract] [Full Text] [Related]

  • 12. Distinct and concurrent pathways of Pol II- and Pol IV-dependent siRNA biogenesis at a repetitive trans-silencer locus in Arabidopsis thaliana.
    Sasaki T, Lee TF, Liao WW, Naumann U, Liao JL, Eun C, Huang YY, Fu JL, Chen PY, Meyers BC, Matzke AJ, Matzke M.
    Plant J; 2014 Jul 26; 79(1):127-38. PubMed ID: 24798377
    [Abstract] [Full Text] [Related]

  • 13. Interplay among RNA polymerases II, IV and V in RNA-directed DNA methylation at a low copy transgene locus in Arabidopsis thaliana.
    You W, Lorkovic ZJ, Matzke AJ, Matzke M.
    Plant Mol Biol; 2013 May 26; 82(1-2):85-96. PubMed ID: 23512103
    [Abstract] [Full Text] [Related]

  • 14. Dicer-independent RNA-directed DNA methylation in Arabidopsis.
    Yang DL, Zhang G, Tang K, Li J, Yang L, Huang H, Zhang H, Zhu JK.
    Cell Res; 2016 Jan 26; 26(1):66-82. PubMed ID: 26642813
    [Abstract] [Full Text] [Related]

  • 15. The Arabidopsis chromatin-modifying nuclear siRNA pathway involves a nucleolar RNA processing center.
    Pontes O, Li CF, Costa Nunes P, Haag J, Ream T, Vitins A, Jacobsen SE, Pikaard CS.
    Cell; 2006 Jul 14; 126(1):79-92. PubMed ID: 16839878
    [Abstract] [Full Text] [Related]

  • 16. Advances of RNA polymerase IV in controlling DNA methylation and development in plants.
    Xu MX, Zhou M.
    Yi Chuan; 2022 Jul 20; 44(7):567-580. PubMed ID: 35858769
    [Abstract] [Full Text] [Related]

  • 17. A protein complex required for polymerase V transcripts and RNA- directed DNA methylation in Arabidopsis.
    Law JA, Ausin I, Johnson LM, Vashisht AA, Zhu JK, Wohlschlegel JA, Jacobsen SE.
    Curr Biol; 2010 May 25; 20(10):951-6. PubMed ID: 20409711
    [Abstract] [Full Text] [Related]

  • 18. A histone H3K4me1-specific binding protein is required for siRNA accumulation and DNA methylation at a subset of loci targeted by RNA-directed DNA methylation.
    Niu Q, Song Z, Tang K, Chen L, Wang L, Ban T, Guo Z, Kim C, Zhang H, Duan CG, Zhang H, Zhu JK, Du J, Lang Z.
    Nat Commun; 2021 Jun 07; 12(1):3367. PubMed ID: 34099688
    [Abstract] [Full Text] [Related]

  • 19. RNA-directed DNA methylation in plants: Where to start?
    Zhang H, He X, Zhu JK.
    RNA Biol; 2013 Oct 07; 10(10):1593-6. PubMed ID: 25003825
    [Abstract] [Full Text] [Related]

  • 20. Identification of Pol IV and RDR2-dependent precursors of 24 nt siRNAs guiding de novo DNA methylation in Arabidopsis.
    Blevins T, Podicheti R, Mishra V, Marasco M, Wang J, Rusch D, Tang H, Pikaard CS.
    Elife; 2015 Oct 02; 4():e09591. PubMed ID: 26430765
    [Abstract] [Full Text] [Related]

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